| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493277
Identifier: 116493277
GI number: 116493277
Start: 1516759
End: 1517115
Strand: Reverse
Name: 116493277
Synonym: PEPE_1549
Alternate gene names: NA
Gene position: 1517115-1516759 (Counterclockwise)
Preceding gene: 116493278
Following gene: 116493276
Centisome position: 82.79
GC content: 33.05
Gene sequence:
>357_bases ATGGAAAATGTGAAGAAAAATAAGAGAAGTATGAAAGCAAGAACAGCGACAGGAGCAGTAAATCCCTATGCTAGGGCCCG TAAACAACGAGCACTATTTATTTTAGGTGTTTTCGCGATTATTGCGACCATTTTTATTTTTCAAATTGTCCATGCACATA TTTCCAGAAGTAGCGTTAATAATAAATTAGCAATGGAAACAGCGCATTATGAAAAGATTCAAAATGATAACAAGGCGCTC AAAGTCAAAGTTAAGCAGATGAACGATGAACAATATTTGGAAAAATTGATTCGTTCTAAATATCTCTATACTAAAAAAGG TGAAACTGTCTATAATTTGCCAAATGATGCAAAATAA
Upstream 100 bases:
>100_bases AAATTACGAACAAGATTTTAGAAAATAATTAAGAAGTTAAAAATGATAGACAGTTAAAGAAAGCGTTGTTATAATTTAAG ATAATTGAGAGGTTATTTTA
Downstream 100 bases:
>100_bases AATTAGATTAAAGCATTGAAATGACGTAGGTCATCTTAATGCTTTTTTTGTTAATTAATGGACTGAATTTGCGTGAACAA AACTCGCAAGGAGTCGGTGT
Product: septum formation initiator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVNNKLAMETAHYEKIQNDNKAL KVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK
Sequences:
>Translated_118_residues MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVNNKLAMETAHYEKIQNDNKAL KVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK >Mature_118_residues MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVNNKLAMETAHYEKIQNDNKAL KVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13616; Mature: 13616
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVN CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKLAMETAHYEKIQNDNKALKVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK CHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCC >Mature Secondary Structure MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVN CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKLAMETAHYEKIQNDNKALKVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK CHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA