Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493277

Identifier: 116493277

GI number: 116493277

Start: 1516759

End: 1517115

Strand: Reverse

Name: 116493277

Synonym: PEPE_1549

Alternate gene names: NA

Gene position: 1517115-1516759 (Counterclockwise)

Preceding gene: 116493278

Following gene: 116493276

Centisome position: 82.79

GC content: 33.05

Gene sequence:

>357_bases
ATGGAAAATGTGAAGAAAAATAAGAGAAGTATGAAAGCAAGAACAGCGACAGGAGCAGTAAATCCCTATGCTAGGGCCCG
TAAACAACGAGCACTATTTATTTTAGGTGTTTTCGCGATTATTGCGACCATTTTTATTTTTCAAATTGTCCATGCACATA
TTTCCAGAAGTAGCGTTAATAATAAATTAGCAATGGAAACAGCGCATTATGAAAAGATTCAAAATGATAACAAGGCGCTC
AAAGTCAAAGTTAAGCAGATGAACGATGAACAATATTTGGAAAAATTGATTCGTTCTAAATATCTCTATACTAAAAAAGG
TGAAACTGTCTATAATTTGCCAAATGATGCAAAATAA

Upstream 100 bases:

>100_bases
AAATTACGAACAAGATTTTAGAAAATAATTAAGAAGTTAAAAATGATAGACAGTTAAAGAAAGCGTTGTTATAATTTAAG
ATAATTGAGAGGTTATTTTA

Downstream 100 bases:

>100_bases
AATTAGATTAAAGCATTGAAATGACGTAGGTCATCTTAATGCTTTTTTTGTTAATTAATGGACTGAATTTGCGTGAACAA
AACTCGCAAGGAGTCGGTGT

Product: septum formation initiator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVNNKLAMETAHYEKIQNDNKAL
KVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK

Sequences:

>Translated_118_residues
MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVNNKLAMETAHYEKIQNDNKAL
KVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK
>Mature_118_residues
MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVNNKLAMETAHYEKIQNDNKAL
KVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK

Specific function: Unknown

COG id: COG2919

COG function: function code D; Septum formation initiator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13616; Mature: 13616

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKLAMETAHYEKIQNDNKALKVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK
CHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MENVKKNKRSMKARTATGAVNPYARARKQRALFILGVFAIIATIFIFQIVHAHISRSSVN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKLAMETAHYEKIQNDNKALKVKVKQMNDEQYLEKLIRSKYLYTKKGETVYNLPNDAK
CHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA