Click here to switch to the map view.

The map label for this gene is ywjB [H]

Identifier: 116493268

GI number: 116493268

Start: 1500495

End: 1501028

Strand: Reverse

Name: ywjB [H]

Synonym: PEPE_1533

Alternate gene names: 116493268

Gene position: 1501028-1500495 (Counterclockwise)

Preceding gene: 116493269

Following gene: 116493267

Centisome position: 81.92

GC content: 36.33

Gene sequence:

>534_bases
ATGGCTAGAAAAGTAATACTTTTTATTGCAATGAGTATTGATAATTACATTGCTGACGATCAAGGTGCCGTTGATTGGTT
GGAGAAAAATGTCCATGGTACCGAAAGTGATGACAGTTATGAGAAAATGTATTCCAAAATAGATACGGTTATTATGGGAA
GAACTACCTATGAACAAGTAACACAAAAATTATCTCCGGAAAAATATGTTTACGCAGATCGGCAGACGTATATTGTTACG
TCTCACCTAGGGGAAGATACAGATAAGATTAAATACTGGAAACAGTCGCCAGTAGAATTAGTTAAAAGGATCCAAAAGGA
GAAGGGAAAAGACGTTTGGATTGTGGGAGGAGCTAAGCTTATTGATCCGCTCGTGCAAGCCAATTTAATTGATACATATA
TTTTAACAACGGTCCCGATTTTTTTAGGATCAGGTATTCGACTTTTTGATCGATTAGAGGAGCAAGTCCCGGTCCGTCTT
ATAGATGTATATCAAAAAAACGAATTAGTATATTCGATTTATCAGAGAGGTTAA

Upstream 100 bases:

>100_bases
TGGATTACTAAGAAGATGCAAGGGATTAGATAATTAAATATTTGAATTCAAGAGATGAACTAGGTTATGCTTAGTTCATC
TTTTTATTTTGGAGGGATTT

Downstream 100 bases:

>100_bases
TAGTTTGAAAATTGCAGCAACTAGCGACAATCATTTCGATGTGAACAAAATAGATGAAAATCAAATGGCTCAAAAACAAG
CCGAGTATCTTTTAAAACAA

Product: dihydrofolate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MARKVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQVTQKLSPEKYVYADRQTYIVT
SHLGEDTDKIKYWKQSPVELVKRIQKEKGKDVWIVGGAKLIDPLVQANLIDTYILTTVPIFLGSGIRLFDRLEEQVPVRL
IDVYQKNELVYSIYQRG

Sequences:

>Translated_177_residues
MARKVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQVTQKLSPEKYVYADRQTYIVT
SHLGEDTDKIKYWKQSPVELVKRIQKEKGKDVWIVGGAKLIDPLVQANLIDTYILTTVPIFLGSGIRLFDRLEEQVPVRL
IDVYQKNELVYSIYQRG
>Mature_176_residues
ARKVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQVTQKLSPEKYVYADRQTYIVTS
HLGEDTDKIKYWKQSPVELVKRIQKEKGKDVWIVGGAKLIDPLVQANLIDTYILTTVPIFLGSGIRLFDRLEEQVPVRLI
DVYQKNELVYSIYQRG

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 20475; Mature: 20344

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQV
CCCEEEEEEEEHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
TQKLSPEKYVYADRQTYIVTSHLGEDTDKIKYWKQSPVELVKRIQKEKGKDVWIVGGAKL
HHHCCCCCEEEECCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCHHH
IDPLVQANLIDTYILTTVPIFLGSGIRLFDRLEEQVPVRLIDVYQKNELVYSIYQRG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHEECCC
>Mature Secondary Structure 
ARKVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQV
CCEEEEEEEEHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
TQKLSPEKYVYADRQTYIVTSHLGEDTDKIKYWKQSPVELVKRIQKEKGKDVWIVGGAKL
HHHCCCCCEEEECCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCHHH
IDPLVQANLIDTYILTTVPIFLGSGIRLFDRLEEQVPVRLIDVYQKNELVYSIYQRG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]