| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493267
Identifier: 116493267
GI number: 116493267
Start: 1499675
End: 1500490
Strand: Reverse
Name: 116493267
Synonym: PEPE_1532
Alternate gene names: NA
Gene position: 1500490-1499675 (Counterclockwise)
Preceding gene: 116493268
Following gene: 116493266
Centisome position: 81.89
GC content: 36.03
Gene sequence:
>816_bases TTGAAAATTGCAGCAACTAGCGACAATCATTTCGATGTGAACAAAATAGATGAAAATCAAATGGCTCAAAAACAAGCCGA GTATCTTTTAAAACAACATGTGGGAGTATATTTAATAGCAGGAGACCTATTTAATAAATTTAATCGAAGCATGCAGTACG TGGAAAAGCTACAGGAATTAGTGGGAGAACACACTAAAGTTTTTTTCATAGCCGGAAATCATGATATGTTGAACGATATC GACTATAATCAATTAGAATCAAATTTAAGCCCATTATACTTACATAACCAGTTCTATGACGTTCCTGGGACTAAATGGCG TATTATTGGAAATAATGGGTGGTACGACTATACGTTTGCAGATAATGTTGATAAAACCACCGAACAGTTTTGGCGTTGGA AAAAGTCTTTCTGGATTGATACTGGAATTGAACAGCCTATGTCAGATATTGAACGAATGAATATTGTGTTGAAGCAAACT GAACAACAAATGCAGCAGGCCAGTCGGAGAAAAGTGTTATTTATGACTCACTTTGCAGTAAGACATGAGTATATTCATTA TTCCGAAGATGCCCGCTTTTGGAACATGATTAATGGAATGGCGGGGAGCAGAAGAATGGAAAAGTTGTTGGAAACATACC AGCCTGAATTGGTGATATCAGGACATTTACATCATCATTTTAAACCACTTGCAAAGTCTAATGGAATATATTATAATAAT TCAGTCGGTTATCATAACAACCGAATCAACGAGTGGAGTTCAGATGATTTCTTCACTGAATGGACTCAGCGATTGCTTAT AACCGATCTCAAATAA
Upstream 100 bases:
>100_bases CGACTTTTTGATCGATTAGAGGAGCAAGTCCCGGTCCGTCTTATAGATGTATATCAAAAAAACGAATTAGTATATTCGAT TTATCAGAGAGGTTAATAGT
Downstream 100 bases:
>100_bases TTTTGAAAAAAGTTTAAAAAAAAGCTTGCAAAATTATTCGAGATTGGGTATTATTATTAAGTCGGATAGATAAGACGACA ACTTATATGGAAGGGTAGCG
Product: phosphohydrolase
Products: NA
Alternate protein names: Metallophosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Phosphoesterase; Serine/Threonine Protein Phosphatase Family Protein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKIAATSDNHFDVNKIDENQMAQKQAEYLLKQHVGVYLIAGDLFNKFNRSMQYVEKLQELVGEHTKVFFIAGNHDMLNDI DYNQLESNLSPLYLHNQFYDVPGTKWRIIGNNGWYDYTFADNVDKTTEQFWRWKKSFWIDTGIEQPMSDIERMNIVLKQT EQQMQQASRRKVLFMTHFAVRHEYIHYSEDARFWNMINGMAGSRRMEKLLETYQPELVISGHLHHHFKPLAKSNGIYYNN SVGYHNNRINEWSSDDFFTEWTQRLLITDLK
Sequences:
>Translated_271_residues MKIAATSDNHFDVNKIDENQMAQKQAEYLLKQHVGVYLIAGDLFNKFNRSMQYVEKLQELVGEHTKVFFIAGNHDMLNDI DYNQLESNLSPLYLHNQFYDVPGTKWRIIGNNGWYDYTFADNVDKTTEQFWRWKKSFWIDTGIEQPMSDIERMNIVLKQT EQQMQQASRRKVLFMTHFAVRHEYIHYSEDARFWNMINGMAGSRRMEKLLETYQPELVISGHLHHHFKPLAKSNGIYYNN SVGYHNNRINEWSSDDFFTEWTQRLLITDLK >Mature_271_residues MKIAATSDNHFDVNKIDENQMAQKQAEYLLKQHVGVYLIAGDLFNKFNRSMQYVEKLQELVGEHTKVFFIAGNHDMLNDI DYNQLESNLSPLYLHNQFYDVPGTKWRIIGNNGWYDYTFADNVDKTTEQFWRWKKSFWIDTGIEQPMSDIERMNIVLKQT EQQMQQASRRKVLFMTHFAVRHEYIHYSEDARFWNMINGMAGSRRMEKLLETYQPELVISGHLHHHFKPLAKSNGIYYNN SVGYHNNRINEWSSDDFFTEWTQRLLITDLK
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32322; Mature: 32322
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAATSDNHFDVNKIDENQMAQKQAEYLLKQHVGVYLIAGDLFNKFNRSMQYVEKLQEL CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH VGEHTKVFFIAGNHDMLNDIDYNQLESNLSPLYLHNQFYDVPGTKWRIIGNNGWYDYTFA HCCCEEEEEEECCCCCCCCCCHHHHHCCCCCEEEECEEECCCCCEEEEEECCCEEEEEEC DNVDKTTEQFWRWKKSFWIDTGIEQPMSDIERMNIVLKQTEQQMQQASRRKVLFMTHFAV CCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHH RHEYIHYSEDARFWNMINGMAGSRRMEKLLETYQPELVISGHLHHHFKPLAKSNGIYYNN HHHHHEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCEEECC SVGYHNNRINEWSSDDFFTEWTQRLLITDLK CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIAATSDNHFDVNKIDENQMAQKQAEYLLKQHVGVYLIAGDLFNKFNRSMQYVEKLQEL CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH VGEHTKVFFIAGNHDMLNDIDYNQLESNLSPLYLHNQFYDVPGTKWRIIGNNGWYDYTFA HCCCEEEEEEECCCCCCCCCCHHHHHCCCCCEEEECEEECCCCCEEEEEECCCEEEEEEC DNVDKTTEQFWRWKKSFWIDTGIEQPMSDIERMNIVLKQTEQQMQQASRRKVLFMTHFAV CCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHH RHEYIHYSEDARFWNMINGMAGSRRMEKLLETYQPELVISGHLHHHFKPLAKSNGIYYNN HHHHHEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCEEECC SVGYHNNRINEWSSDDFFTEWTQRLLITDLK CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA