| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is tarA [H]
Identifier: 116493263
GI number: 116493263
Start: 1495724
End: 1496455
Strand: Direct
Name: tarA [H]
Synonym: PEPE_1526
Alternate gene names: 116493263
Gene position: 1495724-1496455 (Clockwise)
Preceding gene: 116493250
Following gene: 116493282
Centisome position: 81.63
GC content: 36.2
Gene sequence:
>732_bases ATGAAATATAATTTTGTTAATATTCTCGGATTTAATTTTCTGAATGTCACTAAATCACAGTTTTTAAAACAAGTTGAAGA AGATCTTCTTCAACATCAAAATCGTTTTATCATCACTGCTAATCCGGAAATCATCATGTTTGCTCGCAAAAATCCTAATT ACGCAAAAATTGTGCGTTCTGCTGATTATTTAGTTCCTGATGGGATTGGAATCGTTAAAGCATCCAAGTTCACGAAAACG CCGTTGACAGAGCGAGTAACTGGATATGATGTCTTTACTGAACTCATGCAGTGGGCCAATGAACATCATTCCAAAGCCTA CTTCTTAGGTGGGAAACCTGCCGTAATCAAAAAAGTTGTTCATAAAGTTCATCATGAACATCCTGGTATTAATTTGGTTG GTTATCACGACGGCTATTTCAAAGATTCCCTTCCGATTATTGACGAGATTAAAGAACTTCAACCTGAAATAGTTTTTGTA GCTACAGGTTTTCCAAAACAAGAGGAATTTATTGCTAAATATCGTCATTTTACCCCAGCAATCTGGATGGGAATCGGTGG TAGCTTTGACGTCTACGCCGGAACTGTTAAACGGGCTCCTGAATTTTGGCAAAAACATAACGTTGAGTGGTTATATCGTT TATTAAGTGACCCTAAACGAATCAAACGCCAAATAGTATTACCGATTTTTATGATGGAAGCCTTTAAAGCAAATAAAAAG AAGGAAAAATAG
Upstream 100 bases:
>100_bases ATGCTCCTACTCTTTTATGTTTTTATTTAATCTAACAATACAGTTGTTTTAATTTTATCATTTATACATTAAATCGCAAT TTTTAATCTAGGAGACCCTT
Downstream 100 bases:
>100_bases GATTAGCCTATTCTTCCTTCTTTTTTATTAACGATTTAAATAAAATTCAAAACGTTCGCCTACATACTGAGTACGTACAT ATTCAAACGGTGTACCATCT
Product: N-acetylmannosaminyltransferase
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKYNFVNILGFNFLNVTKSQFLKQVEEDLLQHQNRFIITANPEIIMFARKNPNYAKIVRSADYLVPDGIGIVKASKFTKT PLTERVTGYDVFTELMQWANEHHSKAYFLGGKPAVIKKVVHKVHHEHPGINLVGYHDGYFKDSLPIIDEIKELQPEIVFV ATGFPKQEEFIAKYRHFTPAIWMGIGGSFDVYAGTVKRAPEFWQKHNVEWLYRLLSDPKRIKRQIVLPIFMMEAFKANKK KEK
Sequences:
>Translated_243_residues MKYNFVNILGFNFLNVTKSQFLKQVEEDLLQHQNRFIITANPEIIMFARKNPNYAKIVRSADYLVPDGIGIVKASKFTKT PLTERVTGYDVFTELMQWANEHHSKAYFLGGKPAVIKKVVHKVHHEHPGINLVGYHDGYFKDSLPIIDEIKELQPEIVFV ATGFPKQEEFIAKYRHFTPAIWMGIGGSFDVYAGTVKRAPEFWQKHNVEWLYRLLSDPKRIKRQIVLPIFMMEAFKANKK KEK >Mature_243_residues MKYNFVNILGFNFLNVTKSQFLKQVEEDLLQHQNRFIITANPEIIMFARKNPNYAKIVRSADYLVPDGIGIVKASKFTKT PLTERVTGYDVFTELMQWANEHHSKAYFLGGKPAVIKKVVHKVHHEHPGINLVGYHDGYFKDSLPIIDEIKELQPEIVFV ATGFPKQEEFIAKYRHFTPAIWMGIGGSFDVYAGTVKRAPEFWQKHNVEWLYRLLSDPKRIKRQIVLPIFMMEAFKANKK KEK
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=191, Percent_Identity=37.17277486911, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 28270; Mature: 28270
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYNFVNILGFNFLNVTKSQFLKQVEEDLLQHQNRFIITANPEIIMFARKNPNYAKIVRS CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHH ADYLVPDGIGIVKASKFTKTPLTERVTGYDVFTELMQWANEHHSKAYFLGGKPAVIKKVV CCCCCCCCCCEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH HKVHHEHPGINLVGYHDGYFKDSLPIIDEIKELQPEIVFVATGFPKQEEFIAKYRHFTPA HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCE IWMGIGGSFDVYAGTVKRAPEFWQKHNVEWLYRLLSDPKRIKRQIVLPIFMMEAFKANKK EEEECCCCCHHHHHHHHHCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC KEK CCC >Mature Secondary Structure MKYNFVNILGFNFLNVTKSQFLKQVEEDLLQHQNRFIITANPEIIMFARKNPNYAKIVRS CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHH ADYLVPDGIGIVKASKFTKTPLTERVTGYDVFTELMQWANEHHSKAYFLGGKPAVIKKVV CCCCCCCCCCEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH HKVHHEHPGINLVGYHDGYFKDSLPIIDEIKELQPEIVFVATGFPKQEEFIAKYRHFTPA HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCE IWMGIGGSFDVYAGTVKRAPEFWQKHNVEWLYRLLSDPKRIKRQIVLPIFMMEAFKANKK EEEECCCCCHHHHHHHHHCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC KEK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]