| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is manX [H]
Identifier: 116493256
GI number: 116493256
Start: 1485659
End: 1486630
Strand: Reverse
Name: manX [H]
Synonym: PEPE_1518
Alternate gene names: 116493256
Gene position: 1486630-1485659 (Counterclockwise)
Preceding gene: 116493257
Following gene: 116493255
Centisome position: 81.13
GC content: 40.02
Gene sequence:
>972_bases ATGGTTGGAATTATCATTGCTAGTCACGGCGAATTTGCTAAAGGTATTTTGCAATCAGGTTCAATGATCTTCGGTGAACA AGAAGACGTTAAAGCTGTTACATTAATGCCAAGTGAAGGCCCTGACGATATCAGAGCAAAACTTCAAGAAGCAGTTGCTT CTTTTAGTAACCAAGACGAAGTATTATTCTTAGTCGACCTATGGGGAGGCACTCCATTTAATCAAGTTAACAACTTGTTT GAAGAACACAAGGACAAATGGGCAATCGTTGCCGGTTTGAACTTGCCAATGCTAATCGAAGCTTATGCTTCACGTTTATC AATGGAATCAGCACAAGAAATTGCTGCTCATATCATTGAAACTGCTAAAGAAGGGGTTAAGGTTCGTCCCGAAGCTCTTC AACCAGAAGAAGCTCCAAAGGCAGCAGAAAGCGCACAAGTTGCTTCTGGTCGTCCAGGACACTTCGATTATGTCTTAGCT CGTATCGATACTCGTTTACTTCATGGACAAGTTGCTACAGCTTGGACAAAGACGACTAAACCAGATCGAATCATCGTTGT TTCTGATAACGTTGCTAAAGATGAACTTCGTTCTTCAATGATCAAGCAAGCTGCTCCATCAGGAGTTAAGGCTCATATCG TTCCTATTGATCAAATGATTAAACTTGCTAAGGATGATCAACATTTTGGTGGAACCCGTGCCATGCTATTATTTGAAACA CCACAAGATGCTTTGAGAGCAATCGAAGGTGGCGTTCCACTTAAGTCATTAAACGTTGGTTCAATGGCACATTCACCTGG TAAAGTTCAACCTAATAAGGTATTGGCTTTTGACCAAAATGATATTGATACTTACAAGAAGTTGGAAGACATGAACGTTG AACTTGATGTTCGTAAAGTTCCAACCGATTCAAAAGACAATATGGATGCAATTATGAAGAAAGCTCAAGATGAGCTTAAC GCAAAAAAATAA
Upstream 100 bases:
>100_bases AATAAACGTTCAATTTAGATTTAAGTTACAGGTTTTAGAACTTATTTTATTTATTTTTTGATTAAGCTGTAACAATATAA TATGGGAGGTATACAGACAG
Downstream 100 bases:
>100_bases TTTAATTATAACGGAGGATTAATAATCATGGCATTGAATGCAATTCAAATGATTTTAGTCGTTATCGTAGCGTTTTTAGC TGGTGTGGAAGGTATCTTGG
Product: phosphotransferase system, mannose/fructose-specific component IIA
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MVGIIIASHGEFAKGILQSGSMIFGEQEDVKAVTLMPSEGPDDIRAKLQEAVASFSNQDEVLFLVDLWGGTPFNQVNNLF EEHKDKWAIVAGLNLPMLIEAYASRLSMESAQEIAAHIIETAKEGVKVRPEALQPEEAPKAAESAQVASGRPGHFDYVLA RIDTRLLHGQVATAWTKTTKPDRIIVVSDNVAKDELRSSMIKQAAPSGVKAHIVPIDQMIKLAKDDQHFGGTRAMLLFET PQDALRAIEGGVPLKSLNVGSMAHSPGKVQPNKVLAFDQNDIDTYKKLEDMNVELDVRKVPTDSKDNMDAIMKKAQDELN AKK
Sequences:
>Translated_323_residues MVGIIIASHGEFAKGILQSGSMIFGEQEDVKAVTLMPSEGPDDIRAKLQEAVASFSNQDEVLFLVDLWGGTPFNQVNNLF EEHKDKWAIVAGLNLPMLIEAYASRLSMESAQEIAAHIIETAKEGVKVRPEALQPEEAPKAAESAQVASGRPGHFDYVLA RIDTRLLHGQVATAWTKTTKPDRIIVVSDNVAKDELRSSMIKQAAPSGVKAHIVPIDQMIKLAKDDQHFGGTRAMLLFET PQDALRAIEGGVPLKSLNVGSMAHSPGKVQPNKVLAFDQNDIDTYKKLEDMNVELDVRKVPTDSKDNMDAIMKKAQDELN AKK >Mature_323_residues MVGIIIASHGEFAKGILQSGSMIFGEQEDVKAVTLMPSEGPDDIRAKLQEAVASFSNQDEVLFLVDLWGGTPFNQVNNLF EEHKDKWAIVAGLNLPMLIEAYASRLSMESAQEIAAHIIETAKEGVKVRPEALQPEEAPKAAESAQVASGRPGHFDYVLA RIDTRLLHGQVATAWTKTTKPDRIIVVSDNVAKDELRSSMIKQAAPSGVKAHIVPIDQMIKLAKDDQHFGGTRAMLLFET PQDALRAIEGGVPLKSLNVGSMAHSPGKVQPNKVLAFDQNDIDTYKKLEDMNVELDVRKVPTDSKDNMDAIMKKAQDELN AKK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=320, Percent_Identity=41.5625, Blast_Score=234, Evalue=4e-63, Organism=Escherichia coli, GI87082217, Length=150, Percent_Identity=32.6666666666667, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1789527, Length=155, Percent_Identity=31.6129032258064, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR004720 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 35330; Mature: 35330
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS51096 PTS_EIIA_TYPE_4 ; PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGIIIASHGEFAKGILQSGSMIFGEQEDVKAVTLMPSEGPDDIRAKLQEAVASFSNQDE CEEEEEECCCHHHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCC VLFLVDLWGGTPFNQVNNLFEEHKDKWAIVAGLNLPMLIEAYASRLSMESAQEIAAHIIE EEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH TAKEGVKVRPEALQPEEAPKAAESAQVASGRPGHFDYVLARIDTRLLHGQVATAWTKTTK HHHCCCEECCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHEECCCC PDRIIVVSDNVAKDELRSSMIKQAAPSGVKAHIVPIDQMIKLAKDDQHFGGTRAMLLFET CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCEEEEEEEC PQDALRAIEGGVPLKSLNVGSMAHSPGKVQPNKVLAFDQNDIDTYKKLEDMNVELDVRKV CHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEC PTDSKDNMDAIMKKAQDELNAKK CCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVGIIIASHGEFAKGILQSGSMIFGEQEDVKAVTLMPSEGPDDIRAKLQEAVASFSNQDE CEEEEEECCCHHHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCC VLFLVDLWGGTPFNQVNNLFEEHKDKWAIVAGLNLPMLIEAYASRLSMESAQEIAAHIIE EEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH TAKEGVKVRPEALQPEEAPKAAESAQVASGRPGHFDYVLARIDTRLLHGQVATAWTKTTK HHHCCCEECCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHEECCCC PDRIIVVSDNVAKDELRSSMIKQAAPSGVKAHIVPIDQMIKLAKDDQHFGGTRAMLLFET CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCEEEEEEEC PQDALRAIEGGVPLKSLNVGSMAHSPGKVQPNKVLAFDQNDIDTYKKLEDMNVELDVRKV CHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEC PTDSKDNMDAIMKKAQDELNAKK CCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA