Click here to switch to the map view.

The map label for this gene is sorA [H]

Identifier: 116493255

GI number: 116493255

Start: 1484825

End: 1485631

Strand: Reverse

Name: sorA [H]

Synonym: PEPE_1517

Alternate gene names: 116493255

Gene position: 1485631-1484825 (Counterclockwise)

Preceding gene: 116493256

Following gene: 116493254

Centisome position: 81.08

GC content: 43.0

Gene sequence:

>807_bases
ATGGCATTGAATGCAATTCAAATGATTTTAGTCGTTATCGTAGCGTTTTTAGCTGGTGTGGAAGGTATCTTGGATCAATT
CCATTTCCATCAACCAGTAATCGCATGTACTTTAATCGGCTTAGTAACTGGTAACTTAGTACCTTGCCTTATCTTAGGTG
GTTCACTTCAAATGATCGCTCTTGGTTGGGCTAACGTTGGGGCTGCTGTAGCTCCTGATGCTGCTTTGGCTTCTGTAGCT
TCTGCTATTATTTTAGTTTTAGGTGGCCAAGGTAAAGCTGGTGTTTCATCAGCTATCGCTCTTGCTGTTCCTTTAGCTGT
AGCTGGACTATTATTAACAATCATTGCTCGTACACTTGCAACTCTTATCGTTCACGTTATGGATGCTGCTGCTAAAGAAG
GTAGCTTCGGTAAACTTGAAGCATGGCACTATGTTGCTATCTGTATGCAAGGTTTACGTATCGCTATCCCAGCTGGATTG
ATTCTTGCAATCGGTGCTGGTCCCGTACGTAGTTTACTTGCTGCTATGCCTGCTTGGTTGACAGACGGTCTATCAGTTGG
TGGTGGTATGGTTGTTGCCGTTGGTTATGCAATGGTTATCAACATGATGGCTACTAAAGAAGTTTGGCCTTTCTTCGCGC
TTGGTTTCGTTTTAGCAACTATCCCTGATTTGACACTTATCGCTTTAGGTACAATCGGTATTGCTTTGGCTCTTATCTAC
TTAACCCTTTCAAAAATGGGTGGTTCAAGTAACGGAGGCAACTCAGGTTCCGGTGATCCGCTCGGCGATATAATTGATAA
ATACTAA

Upstream 100 bases:

>100_bases
TCCAACCGATTCAAAAGACAATATGGATGCAATTATGAAGAAAGCTCAAGATGAGCTTAACGCAAAAAAATAATTTAATT
ATAACGGAGGATTAATAATC

Downstream 100 bases:

>100_bases
AAGGAGGCCAACAGAAAATGCAAGAAAAAGTTCAATTAACTAAAAAAGATCGTATTCATGTTTGGTTACGTTCAACATTC
CTTCAAGGTTCATGGAACTA

Product: mannose-specific PTS system component IIC

Products: protein histidine; sugar phosphate

Alternate protein names: EIIC-Sor; PTS system sorbose-specific EIIC component [H]

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MALNAIQMILVVIVAFLAGVEGILDQFHFHQPVIACTLIGLVTGNLVPCLILGGSLQMIALGWANVGAAVAPDAALASVA
SAIILVLGGQGKAGVSSAIALAVPLAVAGLLLTIIARTLATLIVHVMDAAAKEGSFGKLEAWHYVAICMQGLRIAIPAGL
ILAIGAGPVRSLLAAMPAWLTDGLSVGGGMVVAVGYAMVINMMATKEVWPFFALGFVLATIPDLTLIALGTIGIALALIY
LTLSKMGGSSNGGNSGSGDPLGDIIDKY

Sequences:

>Translated_268_residues
MALNAIQMILVVIVAFLAGVEGILDQFHFHQPVIACTLIGLVTGNLVPCLILGGSLQMIALGWANVGAAVAPDAALASVA
SAIILVLGGQGKAGVSSAIALAVPLAVAGLLLTIIARTLATLIVHVMDAAAKEGSFGKLEAWHYVAICMQGLRIAIPAGL
ILAIGAGPVRSLLAAMPAWLTDGLSVGGGMVVAVGYAMVINMMATKEVWPFFALGFVLATIPDLTLIALGTIGIALALIY
LTLSKMGGSSNGGNSGSGDPLGDIIDKY
>Mature_267_residues
ALNAIQMILVVIVAFLAGVEGILDQFHFHQPVIACTLIGLVTGNLVPCLILGGSLQMIALGWANVGAAVAPDAALASVAS
AIILVLGGQGKAGVSSAIALAVPLAVAGLLLTIIARTLATLIVHVMDAAAKEGSFGKLEAWHYVAICMQGLRIAIPAGLI
LAIGAGPVRSLLAAMPAWLTDGLSVGGGMVVAVGYAMVINMMATKEVWPFFALGFVLATIPDLTLIALGTIGIALALIYL
TLSKMGGSSNGGNSGSGDPLGDIIDKY

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788121, Length=245, Percent_Identity=48.5714285714286, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1789528, Length=203, Percent_Identity=25.615763546798, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: 2.7.1.69

Molecular weight: Translated: 27034; Mature: 26903

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNAIQMILVVIVAFLAGVEGILDQFHFHQPVIACTLIGLVTGNLVPCLILGGSLQMIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCHHEEE
LGWANVGAAVAPDAALASVASAIILVLGGQGKAGVSSAIALAVPLAVAGLLLTIIARTLA
EEHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIVHVMDAAAKEGSFGKLEAWHYVAICMQGLRIAIPAGLILAIGAGPVRSLLAAMPAWL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCHHHHEEECCCHHHHHHHHHHHHH
TDGLSVGGGMVVAVGYAMVINMMATKEVWPFFALGFVLATIPDLTLIALGTIGIALALIY
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LTLSKMGGSSNGGNSGSGDPLGDIIDKY
HHHHHCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
ALNAIQMILVVIVAFLAGVEGILDQFHFHQPVIACTLIGLVTGNLVPCLILGGSLQMIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCHHEEE
LGWANVGAAVAPDAALASVASAIILVLGGQGKAGVSSAIALAVPLAVAGLLLTIIARTLA
EEHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIVHVMDAAAKEGSFGKLEAWHYVAICMQGLRIAIPAGLILAIGAGPVRSLLAAMPAWL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCHHHHEEECCCHHHHHHHHHHHHH
TDGLSVGGGMVVAVGYAMVINMMATKEVWPFFALGFVLATIPDLTLIALGTIGIALALIY
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LTLSKMGGSSNGGNSGSGDPLGDIIDKY
HHHHHCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]