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The map label for this gene is ybaB [C]

Identifier: 116493221

GI number: 116493221

Start: 1453869

End: 1454183

Strand: Reverse

Name: ybaB [C]

Synonym: PEPE_1483

Alternate gene names: 116493221

Gene position: 1454183-1453869 (Counterclockwise)

Preceding gene: 116493222

Following gene: 116493220

Centisome position: 79.36

GC content: 38.73

Gene sequence:

>315_bases
ATGCGTGGTGGAATGGGAAACATGCAAAGCATGATGCGTCAAATGCAAAAGATGCAAAAAAAGGTAACAGAAGAACAAGA
AAAATTAAATCAAACTGAATTTACGGGTGTGGCACCAGATGACATGGTCAAAGTTGTATTCACCGGTGATCATAGAATGA
AAGACATCGTGATTAATCCTGAAGCAATCGATGAAGATGATCCAGACATGTTACAAGATTTAATTGTAGCCGCTGTAAAC
GACGCTATGAATCGTGTGGATAGTGAAACTAATAAAACAATGGGAAAATACACTAAGGGCATCCCCGGAATGTAA

Upstream 100 bases:

>100_bases
ACCCAAAGCGGATGAAGATAATCAAGCTGTTAAAAAAGCGGTCGAATTATTTGGCTCTGAAAATGTAAATATAAAAAATG
ATTAAAGGATGGTAATACAA

Downstream 100 bases:

>100_bases
TTAAGAATCGTAGGTGATAGACCGTTATGCAATATCCAGAACCGATTGCGAAATTAATCGATAGTTTCATGAAATTACCA
GGTATTGGTTATAAAACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRGGMGNMQSMMRQMQKMQKKVTEEQEKLNQTEFTGVAPDDMVKVVFTGDHRMKDIVINPEAIDEDDPDMLQDLIVAAVN
DAMNRVDSETNKTMGKYTKGIPGM

Sequences:

>Translated_104_residues
MRGGMGNMQSMMRQMQKMQKKVTEEQEKLNQTEFTGVAPDDMVKVVFTGDHRMKDIVINPEAIDEDDPDMLQDLIVAAVN
DAMNRVDSETNKTMGKYTKGIPGM
>Mature_104_residues
MRGGMGNMQSMMRQMQKMQKKVTEEQEKLNQTEFTGVAPDDMVKVVFTGDHRMKDIVINPEAIDEDDPDMLQDLIVAAVN
DAMNRVDSETNKTMGKYTKGIPGM

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=106, Percent_Identity=37.7358490566038, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1483_PEDPA (Q03E58)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804956.1
- ProteinModelPortal:   Q03E58
- SMR:   Q03E58
- STRING:   Q03E58
- GeneID:   4417253
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1483
- NMPDR:   fig|278197.10.peg.1307
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   KYTKGLM
- ProtClustDB:   PRK00153
- BioCyc:   PPEN278197:PEPE_1483-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11728; Mature: 11728

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
12.5 %Met     (Translated Protein)
12.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
12.5 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGMGNMQSMMRQMQKMQKKVTEEQEKLNQTEFTGVAPDDMVKVVFTGDHRMKDIVINP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCEEEEECC
EAIDEDDPDMLQDLIVAAVNDAMNRVDSETNKTMGKYTKGIPGM
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRGGMGNMQSMMRQMQKMQKKVTEEQEKLNQTEFTGVAPDDMVKVVFTGDHRMKDIVINP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCEEEEECC
EAIDEDDPDMLQDLIVAAVNDAMNRVDSETNKTMGKYTKGIPGM
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA