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The map label for this gene is rsmI [H]

Identifier: 116493215

GI number: 116493215

Start: 1449859

End: 1450737

Strand: Reverse

Name: rsmI [H]

Synonym: PEPE_1477

Alternate gene names: 116493215

Gene position: 1450737-1449859 (Counterclockwise)

Preceding gene: 116493216

Following gene: 116493214

Centisome position: 79.17

GC content: 37.66

Gene sequence:

>879_bases
ATGTTAACGCAAAAAAGTTTCAGCCAATCGAATGAAGGACGATTATATCTGGTACCAACGCCGATTGGAAATTTAGAAGA
TATGACTTTCAGAGCAATTAATATTTTGAAAGATGTTGATTTAATCCTAGCTGAAGATACACGAAATACTCAAAAACTAC
TTAATCACTTTGAAATTGATACCAAACAGATGAGCTTCCATGAGCACAATACTCAGCAGCGCATTCCAACAATTTTGAAA
ATGTTAGAAGATGGTCAACAAATTGCTCAGGTATCAGATGCGGGGATGCCGTCAATTAGTGACCCTGGTCAAGAGTTAGT
AAAGGTAGCAGTATCACAACACCTTAACGTCGTACCTTTACCAGGCTCGAATGCCGGAATTACAGCATTAATTGCTTCAG
GATTAGTTCCCCAACCCTTTACTTTTTATGGTTTTCTATCACGCAAAACTAAAGAGCAAAAAGAAGAGCTTGAGGTTTTA
AAAAATAATCCTAATACAGTTATCTTTTACGAAGCACCGCATCGTTTAGCTAAGACCGTCAAACAAATTGGTAGTAGTTT
CGGTACGACTCGTAAAATGGTTTTGGCACGCGAACTTACCAAACGCTATGAGGAGTTTATTCGTGGAAGTATTGAAGAAG
TTCAGCAATGGATTGCTGAAAATGAAGTACGAGGCGAATTTGTAGTGATGGTCGAAGGAAATGATCATCCACAGGTTACT
ACCAATAACGAGTGGGAAAGCATGACGATTAATGAACATGTGCAAAAAATTATCGATGATGAACAAGTTAAACCAACAAT
TGCGATTAAACAGGTCGCTAAATTGCGAGGTTTAAGTAAACAAGAAGTTTATGACATCTATCATCAGTTAGAGCAATAG

Upstream 100 bases:

>100_bases
GCGAGCGGATATCACGTTTGTAATGAATTTTACGGTAAGCATCGTCAAGATGAAGAAGAGTGCGCATTTTGTTTAACCGT
CATCTATGGAGATCGCTAAT

Downstream 100 bases:

>100_bases
GAGAGAATAATGGCTGGAAAGATACATGAAGAACAACATTTAGTAACGCATTACGAAGGTGACCAGACCGGAACAATGAA
AGTTCCCATGATTATTAACG

Product: methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MLTQKSFSQSNEGRLYLVPTPIGNLEDMTFRAINILKDVDLILAEDTRNTQKLLNHFEIDTKQMSFHEHNTQQRIPTILK
MLEDGQQIAQVSDAGMPSISDPGQELVKVAVSQHLNVVPLPGSNAGITALIASGLVPQPFTFYGFLSRKTKEQKEELEVL
KNNPNTVIFYEAPHRLAKTVKQIGSSFGTTRKMVLARELTKRYEEFIRGSIEEVQQWIAENEVRGEFVVMVEGNDHPQVT
TNNEWESMTINEHVQKIIDDEQVKPTIAIKQVAKLRGLSKQEVYDIYHQLEQ

Sequences:

>Translated_292_residues
MLTQKSFSQSNEGRLYLVPTPIGNLEDMTFRAINILKDVDLILAEDTRNTQKLLNHFEIDTKQMSFHEHNTQQRIPTILK
MLEDGQQIAQVSDAGMPSISDPGQELVKVAVSQHLNVVPLPGSNAGITALIASGLVPQPFTFYGFLSRKTKEQKEELEVL
KNNPNTVIFYEAPHRLAKTVKQIGSSFGTTRKMVLARELTKRYEEFIRGSIEEVQQWIAENEVRGEFVVMVEGNDHPQVT
TNNEWESMTINEHVQKIIDDEQVKPTIAIKQVAKLRGLSKQEVYDIYHQLEQ
>Mature_292_residues
MLTQKSFSQSNEGRLYLVPTPIGNLEDMTFRAINILKDVDLILAEDTRNTQKLLNHFEIDTKQMSFHEHNTQQRIPTILK
MLEDGQQIAQVSDAGMPSISDPGQELVKVAVSQHLNVVPLPGSNAGITALIASGLVPQPFTFYGFLSRKTKEQKEELEVL
KNNPNTVIFYEAPHRLAKTVKQIGSSFGTTRKMVLARELTKRYEEFIRGSIEEVQQWIAENEVRGEFVVMVEGNDHPQVT
TNNEWESMTINEHVQKIIDDEQVKPTIAIKQVAKLRGLSKQEVYDIYHQLEQ

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=235, Percent_Identity=46.3829787234043, Blast_Score=219, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33212; Mature: 33212

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQKSFSQSNEGRLYLVPTPIGNLEDMTFRAINILKDVDLILAEDTRNTQKLLNHFEID
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCC
TKQMSFHEHNTQQRIPTILKMLEDGQQIAQVSDAGMPSISDPGQELVKVAVSQHLNVVPL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEC
PGSNAGITALIASGLVPQPFTFYGFLSRKTKEQKEELEVLKNNPNTVIFYEAPHRLAKTV
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
KQIGSSFGTTRKMVLARELTKRYEEFIRGSIEEVQQWIAENEVRGEFVVMVEGNDHPQVT
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCC
TNNEWESMTINEHVQKIIDDEQVKPTIAIKQVAKLRGLSKQEVYDIYHQLEQ
CCCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLTQKSFSQSNEGRLYLVPTPIGNLEDMTFRAINILKDVDLILAEDTRNTQKLLNHFEID
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCC
TKQMSFHEHNTQQRIPTILKMLEDGQQIAQVSDAGMPSISDPGQELVKVAVSQHLNVVPL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEC
PGSNAGITALIASGLVPQPFTFYGFLSRKTKEQKEELEVLKNNPNTVIFYEAPHRLAKTV
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
KQIGSSFGTTRKMVLARELTKRYEEFIRGSIEEVQQWIAENEVRGEFVVMVEGNDHPQVT
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCC
TNNEWESMTINEHVQKIIDDEQVKPTIAIKQVAKLRGLSKQEVYDIYHQLEQ
CCCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]