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The map label for this gene is 116493216

Identifier: 116493216

GI number: 116493216

Start: 1450739

End: 1451080

Strand: Reverse

Name: 116493216

Synonym: PEPE_1478

Alternate gene names: NA

Gene position: 1451080-1450739 (Counterclockwise)

Preceding gene: 116493217

Following gene: 116493215

Centisome position: 79.19

GC content: 35.38

Gene sequence:

>342_bases
GTGGATAAAAAAGATTTATTTGATCAAATAACAGAAGTCACGCGAAATACTGAGGATTTGTTAAATAAACTACACGAAAC
CCAAAGTGCCATGGTGGAAATCATGGAAGAAAATGCTGAACTTCAAATTGAAAATCAACATTTGAGAGAGCGTCTAAAGC
AAGCAACCGCTGCTGAAAATGAAGGAACTAAGAACACAAAATATGGTTTATCAAAGTCACTTCAAAACTTAGAAAAATTA
TATGCGAGCGGATATCACGTTTGTAATGAATTTTACGGTAAGCATCGTCAAGATGAAGAAGAGTGCGCATTTTGTTTAAC
CGTCATCTATGGAGATCGCTAA

Upstream 100 bases:

>100_bases
CCTTTAAAACATCAGTTAAGTCAGAATTTAAATTTTCAAAGCGTTGTGGAAAAAGCAACGATTAAAATATGTAATATATT
CAAAATGAGAGGGCGATAGT

Downstream 100 bases:

>100_bases
TATGTTAACGCAAAAAAGTTTCAGCCAATCGAATGAAGGACGATTATATCTGGTACCAACGCCGATTGGAAATTTAGAAG
ATATGACTTTCAGAGCAATT

Product: regulator of replication initiation timing

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDKKDLFDQITEVTRNTEDLLNKLHETQSAMVEIMEENAELQIENQHLRERLKQATAAENEGTKNTKYGLSKSLQNLEKL
YASGYHVCNEFYGKHRQDEEECAFCLTVIYGDR

Sequences:

>Translated_113_residues
MDKKDLFDQITEVTRNTEDLLNKLHETQSAMVEIMEENAELQIENQHLRERLKQATAAENEGTKNTKYGLSKSLQNLEKL
YASGYHVCNEFYGKHRQDEEECAFCLTVIYGDR
>Mature_113_residues
MDKKDLFDQITEVTRNTEDLLNKLHETQSAMVEIMEENAELQIENQHLRERLKQATAAENEGTKNTKYGLSKSLQNLEKL
YASGYHVCNEFYGKHRQDEEECAFCLTVIYGDR

Specific function: Involved in initiation control of chromosome replication

COG id: COG4467

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yabA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YABA_PEDPA (Q03E63)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804951.1
- STRING:   Q03E63
- GeneID:   4417329
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1478
- NMPDR:   fig|278197.10.peg.1302
- eggNOG:   COG4467
- HOGENOM:   HBG514867
- OMA:   VHYGSVR
- BioCyc:   PPEN278197:PEPE_1478-MONOMER
- HAMAP:   MF_01159
- InterPro:   IPR010377
- PIRSF:   PIRSF021439

Pfam domain/function: PF06156 DUF972

EC number: NA

Molecular weight: Translated: 13175; Mature: 13175

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKDLFDQITEVTRNTEDLLNKLHETQSAMVEIMEENAELQIENQHLRERLKQATAAEN
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCC
EGTKNTKYGLSKSLQNLEKLYASGYHVCNEFYGKHRQDEEECAFCLTVIYGDR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKKDLFDQITEVTRNTEDLLNKLHETQSAMVEIMEENAELQIENQHLRERLKQATAAEN
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCC
EGTKNTKYGLSKSLQNLEKLYASGYHVCNEFYGKHRQDEEECAFCLTVIYGDR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA