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The map label for this gene is ydiC [H]

Identifier: 116493212

GI number: 116493212

Start: 1447183

End: 1447911

Strand: Reverse

Name: ydiC [H]

Synonym: PEPE_1474

Alternate gene names: 116493212

Gene position: 1447911-1447183 (Counterclockwise)

Preceding gene: 116493213

Following gene: 116493211

Centisome position: 79.02

GC content: 35.12

Gene sequence:

>729_bases
ATGAAGATTTTAGCTATGGATACGTCCAACGTTACTTTAAGTGTAGCGGTTTTGGATTCAGAACAATTACTAGCTATGCA
AACCACTAATATTAAAAGAAATCATAGTAAACAACTGATGCCAATTATTTCGCAAACTCTTGCAGAAGCAGGGATGGCAC
TAAACGAAATTGACCGGATTGTTGTTGCCAAAGGACCGGGCTCATATACTGGGTTACGAATCGCCGTTACTACGGCCAAA
ACATTAGCATTAACGTTAAATGCTGAGTTAGTAGGAGTATCTAGTTTAGAAATGTTGGTTCCTAACGCACCTCAAAATGG
TTTAGTAGTCCCATTCTTTGACGCTAGAAATGGAAATGTATTCGCCGGAATTTATGAGAAAAATGGAGAACAAGTTGTAA
ACGTACTAGCAGACCAACATATTAGTTTTGAAAAATTATTGGCTAAGATTAATGAGTTAGGTCGACCAGTTTACTTTGTA
TCTTCTCAATTTGAACAATTTCAAACAATGGTAGAAAATACGTTGGTTGTTGTTGCAGAACATTCTGGAAAATTAAACAG
TTTACCAAATGCGCATGCATTAGGAATCTTAGGATTACAAAAAACAGAACTTGAAAATGTTTATACTTTTGTACCAGCTT
ATTTACGAGTGACAGAAGCAGAAAGAAATTGGAAGGAAAAGCATCCAAACGATGAAAACAAAGAATCATATGTTAGACAA
ATTAATTAA

Upstream 100 bases:

>100_bases
TTTTGAAAGAAATGACCTTGAAAGGACGAATTTATTCTTTGTTGTCGTCATCACTATTCTGTAGGATAATATGTAGAGGA
ATTAAAAGGGAGCGAACTGA

Downstream 100 bases:

>100_bases
TTGGGCTAAATACACTTTTTTTAATCGGACACGACGTTTGCGTGAGGAGGCTTTTGAAATTAAACACCATAATGTTGTAA
TCGAAGGTGAAAGATATTTT

Product: metal-dependent protease-like protein, putative molecular chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKILAMDTSNVTLSVAVLDSEQLLAMQTTNIKRNHSKQLMPIISQTLAEAGMALNEIDRIVVAKGPGSYTGLRIAVTTAK
TLALTLNAELVGVSSLEMLVPNAPQNGLVVPFFDARNGNVFAGIYEKNGEQVVNVLADQHISFEKLLAKINELGRPVYFV
SSQFEQFQTMVENTLVVVAEHSGKLNSLPNAHALGILGLQKTELENVYTFVPAYLRVTEAERNWKEKHPNDENKESYVRQ
IN

Sequences:

>Translated_242_residues
MKILAMDTSNVTLSVAVLDSEQLLAMQTTNIKRNHSKQLMPIISQTLAEAGMALNEIDRIVVAKGPGSYTGLRIAVTTAK
TLALTLNAELVGVSSLEMLVPNAPQNGLVVPFFDARNGNVFAGIYEKNGEQVVNVLADQHISFEKLLAKINELGRPVYFV
SSQFEQFQTMVENTLVVVAEHSGKLNSLPNAHALGILGLQKTELENVYTFVPAYLRVTEAERNWKEKHPNDENKESYVRQ
IN
>Mature_242_residues
MKILAMDTSNVTLSVAVLDSEQLLAMQTTNIKRNHSKQLMPIISQTLAEAGMALNEIDRIVVAKGPGSYTGLRIAVTTAK
TLALTLNAELVGVSSLEMLVPNAPQNGLVVPFFDARNGNVFAGIYEKNGEQVVNVLADQHISFEKLLAKINELGRPVYFV
SSQFEQFQTMVENTLVVVAEHSGKLNSLPNAHALGILGLQKTELENVYTFVPAYLRVTEAERNWKEKHPNDENKESYVRQ
IN

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=131, Percent_Identity=32.824427480916, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 26693; Mature: 26693

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILAMDTSNVTLSVAVLDSEQLLAMQTTNIKRNHSKQLMPIISQTLAEAGMALNEIDRI
CEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEE
VVAKGPGSYTGLRIAVTTAKTLALTLNAELVGVSSLEMLVPNAPQNGLVVPFFDARNGNV
EEECCCCCCCEEEEEEEEEEEEEEEECCEEEECCEEEEECCCCCCCCEEEEEEECCCCCE
FAGIYEKNGEQVVNVLADQHISFEKLLAKINELGRPVYFVSSQFEQFQTMVENTLVVVAE
EEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCEEEEEEE
HSGKLNSLPNAHALGILGLQKTELENVYTFVPAYLRVTEAERNWKEKHPNDENKESYVRQ
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCCCCHHHHHHC
IN
CC
>Mature Secondary Structure
MKILAMDTSNVTLSVAVLDSEQLLAMQTTNIKRNHSKQLMPIISQTLAEAGMALNEIDRI
CEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEE
VVAKGPGSYTGLRIAVTTAKTLALTLNAELVGVSSLEMLVPNAPQNGLVVPFFDARNGNV
EEECCCCCCCEEEEEEEEEEEEEEEECCEEEECCEEEEECCCCCCCCEEEEEEECCCCCE
FAGIYEKNGEQVVNVLADQHISFEKLLAKINELGRPVYFVSSQFEQFQTMVENTLVVVAE
EEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCEEEEEEE
HSGKLNSLPNAHALGILGLQKTELENVYTFVPAYLRVTEAERNWKEKHPNDENKESYVRQ
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHEEEEHHHHHHHHCCCCCCCHHHHHHC
IN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]