Click here to switch to the map view.

The map label for this gene is pepDB [H]

Identifier: 116493193

GI number: 116493193

Start: 1427922

End: 1429328

Strand: Direct

Name: pepDB [H]

Synonym: PEPE_1455

Alternate gene names: 116493193

Gene position: 1427922-1429328 (Clockwise)

Preceding gene: 116493190

Following gene: 116493207

Centisome position: 77.93

GC content: 40.01

Gene sequence:

>1407_bases
ATGAATAAGAAAATTAAAGGTTCTTGCACGACCATTTTGGTCGGTAAAGATGCTTCTATTGATGGTTCAACGATTATTTC
CCGTAATGATGATGGTCATGAAGCTCTTGATCCTCAACGTTTCGTGGTCGTTAACCCCGAGGAACAACCACGTGATTACC
AAGCCATTATCAGTGGTGTTAAAATCAAGCTTCCTGATCAGCCTTTGAGTTACACATCAATGCCAAATTCCATTTTAACT
AACGGAATCTGGCCCGCAGCGGGGATTAATAGTGAAAATATTGCCATGTCTGCAACCGAGACAATCACTACTAATTCACG
CGTCTTAGGTATGGACCCCTTCGTAGAGAATGGAATTGGTGAAGAAGACATTGTTACTCTCGTCCTTCCATATATTCACA
GCGCACGTGAAGGTGTTAAACGCTTAGGCGCTCTTTTAGAAAAGTTTGGAACATATGAACCTAATGGTATCGCTTTTTCT
GATAACGAAGAAGTTTGGTGGTTGGAGACGATTGGTGGCCATCATTGGGCTGCCGTTCGTATACCAGATGACGCCTACGT
TGTGGCACCTAACCGTATGAATATTGATCAATTTGATTTTGAATCTGATGACACGCTATGCTCAGTTGATTTAAAAGATT
TAATTGATGAATATCACTTAAATCCTGATTTTGACGGTTATAATTTCCGTCATATCTTTGGTAGTGCTTCTATTAAAGAT
ACTGTTTACAATAATCCCCGTACTTGGTATGGCCAAAAATACTTCAACCCTGAGATTGAAAATGATCCCATGGAGCAAGA
TTTACCTTTTATCTGTCATGCTAACAAAAAGATCTCTATTGAAGACGTTAAGTTTGTTTTGAGCTCCCACTTTGAAAATA
CGGAATTTGATCCATATGGTAACGGTACTGAGGACCAAAAGACCCTCTTTCGTCCAATCGGTATCAATCGGAATCATAAT
GTCCACATCCTTCAAATCCGAAACCATGTTCCAGCAGAAATTGCCGGCATTCACTGGCTTGCATACGGAGCCAACACGTT
CAACACGGTAGTTCCTTTTTACGCTCATGTCACCGACACACCAGCTGTCTATAAGAATGCAACTGGTACATTTGATATGA
ACAACATGTATTGGCTGAGCTGTACTACCGCTCTTTTAGGTGATACAGATTACGACTTATACGTTGATCTTCGGAACACC
TTCGAACTTGAAACCACTGGTATTTATCGTCGAATTCAAAATGAAACTGATCGGGCAATCAAGCACCAAACTAACCCAAC
TCAATTTCTTGAACAAGCTAATGAACAACTAGCTACAGAATCCTTTACCCGTCAAACTAAATTACTTGGTGACATGGTAA
CATTAGGATCAGCTCACATGAAATTACGCTATAACTTAAATGATTAA

Upstream 100 bases:

>100_bases
ACGAACATTATTATTTTTAAAACGTTTTATCGTTCGTTACCAAAAACAATTTAAAAGCGCTATAATAGAAAATAACAAAT
TTTTAGGAGGTTTTTAATCT

Downstream 100 bases:

>100_bases
AATAAAAAAACGATTTTAAGTAACTATGATATCTTCCGAATTGAGACAAAAATTCTAAGATAACAGTTAATGTCCTCATC
GACACTTAAAATCGTTTTTT

Product: dipeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MNKKIKGSCTTILVGKDASIDGSTIISRNDDGHEALDPQRFVVVNPEEQPRDYQAIISGVKIKLPDQPLSYTSMPNSILT
NGIWPAAGINSENIAMSATETITTNSRVLGMDPFVENGIGEEDIVTLVLPYIHSAREGVKRLGALLEKFGTYEPNGIAFS
DNEEVWWLETIGGHHWAAVRIPDDAYVVAPNRMNIDQFDFESDDTLCSVDLKDLIDEYHLNPDFDGYNFRHIFGSASIKD
TVYNNPRTWYGQKYFNPEIENDPMEQDLPFICHANKKISIEDVKFVLSSHFENTEFDPYGNGTEDQKTLFRPIGINRNHN
VHILQIRNHVPAEIAGIHWLAYGANTFNTVVPFYAHVTDTPAVYKNATGTFDMNNMYWLSCTTALLGDTDYDLYVDLRNT
FELETTGIYRRIQNETDRAIKHQTNPTQFLEQANEQLATESFTRQTKLLGDMVTLGSAHMKLRYNLND

Sequences:

>Translated_468_residues
MNKKIKGSCTTILVGKDASIDGSTIISRNDDGHEALDPQRFVVVNPEEQPRDYQAIISGVKIKLPDQPLSYTSMPNSILT
NGIWPAAGINSENIAMSATETITTNSRVLGMDPFVENGIGEEDIVTLVLPYIHSAREGVKRLGALLEKFGTYEPNGIAFS
DNEEVWWLETIGGHHWAAVRIPDDAYVVAPNRMNIDQFDFESDDTLCSVDLKDLIDEYHLNPDFDGYNFRHIFGSASIKD
TVYNNPRTWYGQKYFNPEIENDPMEQDLPFICHANKKISIEDVKFVLSSHFENTEFDPYGNGTEDQKTLFRPIGINRNHN
VHILQIRNHVPAEIAGIHWLAYGANTFNTVVPFYAHVTDTPAVYKNATGTFDMNNMYWLSCTTALLGDTDYDLYVDLRNT
FELETTGIYRRIQNETDRAIKHQTNPTQFLEQANEQLATESFTRQTKLLGDMVTLGSAHMKLRYNLND
>Mature_468_residues
MNKKIKGSCTTILVGKDASIDGSTIISRNDDGHEALDPQRFVVVNPEEQPRDYQAIISGVKIKLPDQPLSYTSMPNSILT
NGIWPAAGINSENIAMSATETITTNSRVLGMDPFVENGIGEEDIVTLVLPYIHSAREGVKRLGALLEKFGTYEPNGIAFS
DNEEVWWLETIGGHHWAAVRIPDDAYVVAPNRMNIDQFDFESDDTLCSVDLKDLIDEYHLNPDFDGYNFRHIFGSASIKD
TVYNNPRTWYGQKYFNPEIENDPMEQDLPFICHANKKISIEDVKFVLSSHFENTEFDPYGNGTEDQKTLFRPIGINRNHN
VHILQIRNHVPAEIAGIHWLAYGANTFNTVVPFYAHVTDTPAVYKNATGTFDMNNMYWLSCTTALLGDTDYDLYVDLRNT
FELETTGIYRRIQNETDRAIKHQTNPTQFLEQANEQLATESFTRQTKLLGDMVTLGSAHMKLRYNLND

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 52979; Mature: 52979

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIKGSCTTILVGKDASIDGSTIISRNDDGHEALDPQRFVVVNPEEQPRDYQAIISGV
CCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCC
KIKLPDQPLSYTSMPNSILTNGIWPAAGINSENIAMSATETITTNSRVLGMDPFVENGIG
EEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCHHHCCCC
EEDIVTLVLPYIHSAREGVKRLGALLEKFGTYEPNGIAFSDNEEVWWLETIGGHHWAAVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEEE
IPDDAYVVAPNRMNIDQFDFESDDTLCSVDLKDLIDEYHLNPDFDGYNFRHIFGSASIKD
ECCCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCH
TVYNNPRTWYGQKYFNPEIENDPMEQDLPFICHANKKISIEDVKFVLSSHFENTEFDPYG
HHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC
NGTEDQKTLFRPIGINRNHNVHILQIRNHVPAEIAGIHWLAYGANTFNTVVPFYAHVTDT
CCCCCHHHHEEECCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHEEEEEEECCC
PAVYKNATGTFDMNNMYWLSCTTALLGDTDYDLYVDLRNTFELETTGIYRRIQNETDRAI
CHHHCCCCCEEECCCEEEEEEEHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHCHHHHHH
KHQTNPTQFLEQANEQLATESFTRQTKLLGDMVTLGSAHMKLRYNLND
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
>Mature Secondary Structure
MNKKIKGSCTTILVGKDASIDGSTIISRNDDGHEALDPQRFVVVNPEEQPRDYQAIISGV
CCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCC
KIKLPDQPLSYTSMPNSILTNGIWPAAGINSENIAMSATETITTNSRVLGMDPFVENGIG
EEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCHHHCCCC
EEDIVTLVLPYIHSAREGVKRLGALLEKFGTYEPNGIAFSDNEEVWWLETIGGHHWAAVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEEE
IPDDAYVVAPNRMNIDQFDFESDDTLCSVDLKDLIDEYHLNPDFDGYNFRHIFGSASIKD
ECCCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCH
TVYNNPRTWYGQKYFNPEIENDPMEQDLPFICHANKKISIEDVKFVLSSHFENTEFDPYG
HHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC
NGTEDQKTLFRPIGINRNHNVHILQIRNHVPAEIAGIHWLAYGANTFNTVVPFYAHVTDT
CCCCCHHHHEEECCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHEEEEEEECCC
PAVYKNATGTFDMNNMYWLSCTTALLGDTDYDLYVDLRNTFELETTGIYRRIQNETDRAI
CHHHCCCCCEEECCCEEEEEEEHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHCHHHHHH
KHQTNPTQFLEQANEQLATESFTRQTKLLGDMVTLGSAHMKLRYNLND
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]