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The map label for this gene is rihA [H]

Identifier: 116493168

GI number: 116493168

Start: 1397584

End: 1398534

Strand: Direct

Name: rihA [H]

Synonym: PEPE_1424

Alternate gene names: 116493168

Gene position: 1397584-1398534 (Clockwise)

Preceding gene: 116493129

Following gene: 116493173

Centisome position: 76.27

GC content: 38.17

Gene sequence:

>951_bases
TTGCAAAATATTTATTTTAATCATGATGGTAATGTCGACGATCTTGTATCTTTACTTCTACTATTGGAATTTCCAGATAC
AAAGTTAATTGGAGTGGGGGCAGTTGGAGCAGATTCCTATGTAGAACCTGCTGTTTCAGCATCTAGAAAAATCATTGATC
TTTTTGGTCAAGATACTACCCTAGAAGTTGCTAAATCTAATTCACGCCCAGTAAATCAATTCCCCAAAGAATGGCGCCTC
AGCGCTTTTTCATTTGATGATTTTCCCATTTTAAACGAACACTTGGATAACAATAATCAACCTAAAACTAAATTGGCATC
TCAACCAGCTCATTTAGATATGTTAGAGAAGATTAAAGCTTCTCAGCAGAAGGTGACTTTGATTATGACTGGTCCATTAA
CTGATCTGGCTCGTGCCATCGAAATCGATCCTACAATTGTGGACAATATCGATGAACTATTCTGGATGGGTGGATCAATG
AACGGGGTTGGTAATGTTGCTGAACCCGAACATGATGGTACAGCTGAATGGAATGCATACTGGGATCCTCAAGCTGTCGA
AACCGTCTTTGATACGGACCTAAAAATTACCATTGTTAGTTTAGATAGTACTAACCAAGTTCCCTTGACTAAAGCTTTAC
GTATTCGTTGGGCTAAGCAGCGCCAATTCCCTGCTTTAGATTTAATTGGTCAAGGTTATTCTCTAGTTCACTCTTTTGAA
GCTAACTCAACTTATTATTTATGGGATGTTCTAACTACTCTTGTAAGTAAATATCCTGAATTAGTTGATAGTAAACCAAT
TAAAGCTGCTGTTATCACCGATGGTCCCTCGGCTGGAAAAACTTTTGTTACTGATAACGGACGTCCTTTAACCTTCGTTA
CTCAAGTAAATTCCGCTCTCTTCTTTGATAAATTCGATGAGCTAGCGCAAGCAGCTAAAACCAACTATTAA

Upstream 100 bases:

>100_bases
TTCAGTAAAAATCATTAATATACTTCGCGAAAATCATTTTATAAACACAACATACGAACTTTATGCTATCATTACTTTAA
TAAATTTGGGAGGTCCTACT

Downstream 100 bases:

>100_bases
TTCATCGCGTTTCTTAAAATTACCATAATAAAAAAGCTCACCAAACTGTGTTATCCACAATTTGGTGAGCTTTTTATCTA
AAAACTATTATTCAACAGTT

Product: inosine-uridine nucleoside N-ribohydrolase

Products: NA

Alternate protein names: Cytidine/uridine-specific hydrolase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MQNIYFNHDGNVDDLVSLLLLLEFPDTKLIGVGAVGADSYVEPAVSASRKIIDLFGQDTTLEVAKSNSRPVNQFPKEWRL
SAFSFDDFPILNEHLDNNNQPKTKLASQPAHLDMLEKIKASQQKVTLIMTGPLTDLARAIEIDPTIVDNIDELFWMGGSM
NGVGNVAEPEHDGTAEWNAYWDPQAVETVFDTDLKITIVSLDSTNQVPLTKALRIRWAKQRQFPALDLIGQGYSLVHSFE
ANSTYYLWDVLTTLVSKYPELVDSKPIKAAVITDGPSAGKTFVTDNGRPLTFVTQVNSALFFDKFDELAQAAKTNY

Sequences:

>Translated_316_residues
MQNIYFNHDGNVDDLVSLLLLLEFPDTKLIGVGAVGADSYVEPAVSASRKIIDLFGQDTTLEVAKSNSRPVNQFPKEWRL
SAFSFDDFPILNEHLDNNNQPKTKLASQPAHLDMLEKIKASQQKVTLIMTGPLTDLARAIEIDPTIVDNIDELFWMGGSM
NGVGNVAEPEHDGTAEWNAYWDPQAVETVFDTDLKITIVSLDSTNQVPLTKALRIRWAKQRQFPALDLIGQGYSLVHSFE
ANSTYYLWDVLTTLVSKYPELVDSKPIKAAVITDGPSAGKTFVTDNGRPLTFVTQVNSALFFDKFDELAQAAKTNY
>Mature_316_residues
MQNIYFNHDGNVDDLVSLLLLLEFPDTKLIGVGAVGADSYVEPAVSASRKIIDLFGQDTTLEVAKSNSRPVNQFPKEWRL
SAFSFDDFPILNEHLDNNNQPKTKLASQPAHLDMLEKIKASQQKVTLIMTGPLTDLARAIEIDPTIVDNIDELFWMGGSM
NGVGNVAEPEHDGTAEWNAYWDPQAVETVFDTDLKITIVSLDSTNQVPLTKALRIRWAKQRQFPALDLIGQGYSLVHSFE
ANSTYYLWDVLTTLVSKYPELVDSKPIKAAVITDGPSAGKTFVTDNGRPLTFVTQVNSALFFDKFDELAQAAKTNY

Specific function: Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively [H]

COG id: COG1957

COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IUNH family. RihA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788486, Length=277, Percent_Identity=25.2707581227437, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786213, Length=181, Percent_Identity=30.3867403314917, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015910
- InterPro:   IPR023186
- InterPro:   IPR001910
- InterPro:   IPR022975 [H]

Pfam domain/function: PF01156 IU_nuc_hydro [H]

EC number: 3.2.2.-

Molecular weight: Translated: 35102; Mature: 35102

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIYFNHDGNVDDLVSLLLLLEFPDTKLIGVGAVGADSYVEPAVSASRKIIDLFGQDTT
CCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHCCCCE
LEVAKSNSRPVNQFPKEWRLSAFSFDDFPILNEHLDNNNQPKTKLASQPAHLDMLEKIKA
EEEECCCCCCHHHCCHHHCCEEECCCCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHC
SQQKVTLIMTGPLTDLARAIEIDPTIVDNIDELFWMGGSMNGVGNVAEPEHDGTAEWNAY
CCCEEEEEEECCHHHHHHHHCCCCHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
WDPQAVETVFDTDLKITIVSLDSTNQVPLTKALRIRWAKQRQFPALDLIGQGYSLVHSFE
CCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEC
ANSTYYLWDVLTTLVSKYPELVDSKPIKAAVITDGPSAGKTFVTDNGRPLTFVTQVNSAL
CCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCHH
FFDKFDELAQAAKTNY
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQNIYFNHDGNVDDLVSLLLLLEFPDTKLIGVGAVGADSYVEPAVSASRKIIDLFGQDTT
CCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHCCCCE
LEVAKSNSRPVNQFPKEWRLSAFSFDDFPILNEHLDNNNQPKTKLASQPAHLDMLEKIKA
EEEECCCCCCHHHCCHHHCCEEECCCCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHC
SQQKVTLIMTGPLTDLARAIEIDPTIVDNIDELFWMGGSMNGVGNVAEPEHDGTAEWNAY
CCCEEEEEEECCHHHHHHHHCCCCHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
WDPQAVETVFDTDLKITIVSLDSTNQVPLTKALRIRWAKQRQFPALDLIGQGYSLVHSFE
CCCHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEC
ANSTYYLWDVLTTLVSKYPELVDSKPIKAAVITDGPSAGKTFVTDNGRPLTFVTQVNSAL
CCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCHH
FFDKFDELAQAAKTNY
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA