Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493173

Identifier: 116493173

GI number: 116493173

Start: 1409933

End: 1410022

Strand: Direct

Name: 116493173

Synonym: PEPE_1435

Alternate gene names: NA

Gene position: 1409933-1410022 (Clockwise)

Preceding gene: 116493168

Following gene: 116493178

Centisome position: 76.95

GC content: 22.22

Gene sequence:

>90_bases
ATGTCAATCACTTTTGCAAAAAAAATTAAATTTTTCTTTATTAATTTTTTTAATAGCTTTAAATCACCCTTTTTCTCCCA
TATTTGCTGA

Upstream 100 bases:

>100_bases
TGTGACCTCCTGCTTGTAAGGCAGATGCTCTCCCAACTGAGCTAATCCTCCATAAATCTCTCGTGAACACATTTATATAT
AATACGGATAAAACTCCGTT

Downstream 100 bases:

>100_bases
AAAACATTTCTAATCAGAGGCTTATCCTTTATGGATTCCATAAAAAAATAAGAGATCTCAATGCGATCTCTTATTTTTAG
ATAACTATTTACTTTTTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 29; Mature: 28

Protein sequence:

>29_residues
MSITFAKKIKFFFINFFNSFKSPFFSHIC

Sequences:

>Translated_29_residues
MSITFAKKIKFFFINFFNSFKSPFFSHIC
>Mature_28_residues
SITFAKKIKFFFINFFNSFKSPFFSHIC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3525; Mature: 3394

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITFAKKIKFFFINFFNSFKSPFFSHIC
CCCCHHHHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure 
SITFAKKIKFFFINFFNSFKSPFFSHIC
CCCHHHHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA