| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is gntK [H]
Identifier: 116493107
GI number: 116493107
Start: 1347533
End: 1349095
Strand: Reverse
Name: gntK [H]
Synonym: PEPE_1361
Alternate gene names: 116493107
Gene position: 1349095-1347533 (Counterclockwise)
Preceding gene: 116493108
Following gene: 116493106
Centisome position: 73.63
GC content: 39.48
Gene sequence:
>1563_bases ATGGATTATATGATTGGTGTTGATCTTGGCACTACTAGTACAAAAGTAGTTTTATTTGATATGAAGGGAAATTCAATTGC CTATGCAAACAATCCTTATCCTTTATATCAGGATAGTCCAGATATGGCCGAGGAAGATCCAGCCGAAATTTTTGAAGCAG TTATTAATGGATTAACTGAAGTGATGCGTAAGGGAAATGTTAAGAATGGTGAATTAAAGGGAGTATCATTCTCAAGTGCG ATGCATAGTTTGATTTTGATGGATAAAGATAATCATCCATTAACTAGAGTTATAACTTGGGCAGATAACCGTTCGAGCAA GTATGCTGAAGAATTAAAGGACAATGGACTTGGCCAACAATTATACGCCCATACTGGTGTACCCACTCATCCAATGTCAC CATTAGTTAAATTGATTTGGTTAAAGAATGAACAACCAGAAATTTTTAAAAAGGCGACTCATTTTATTGGTATTAAGGAT TATGTTTTATTTCGATTATATGGAAAGTATGTTCAGGACTACTCTCTTGCTAACGCGACTGGACTATTTAACATTTTCAC GATGGATTGGGATGAACAAGCCCTTGAAATTACGGGTGTAACGCGAGACCAGCTTCCAGAATTAGTTTCCCCTGAATATC AATTAACGGGGTTAGCTAAATCGTATGCGGAGGTGACTGGGATTCCGGAAGATACTCCGTTCATCATGGGAGCTAGTGAT GGTACCCTTAGTAATCTAGGGGTTAATGCAATTGAACCAGGAGTTTTGGCGGTAACAATTGGAACTTCTGGAGCAGTACG CGTGGTTGTGGATAAGCCAGTTGTTGATCCACGGGGTCGATTATTCACATATTACTTAGATGATGGTAAGTGGGTAGTAG GTGGACCGGTCAATAATGGTGGAATTGTATTTCGCTGGGTTCGCGATCAATTATTCTCTCCTGAAAAAATTACGGCTGAA CAAATGCAAGTCAATTCTTATGAAATTTTAACCGACATTGCTTCTAAGATTCCAGCTGGCGCAGATGGACTATTATTTCA CCCATATTTAGGCGGAGAAAGAGCGCCGATTTGGGATGCAAACGCACGTGGAAGTTTCTTCGGATTAACGCGTCAACATA CTCGTGCACACATGGTTAGAGCAGCTTTGGAAGGCATTGTATATAACCTTTACATGGTAATGCTAATGATTGAAGGAGTA GCCGGTAAACCGAAATCAATTCAAGCCACCGGTGGATTTGCTAGGAGCGCACTTTGGCGTCAAATGTTAGCTGACATTTT TGAACAAGATGTTAATATTCCAGAAAGTTTTGAAAGCTCAGCGCTGGGGGCCGTGGTGATAGGGATGAAGAGTTTGGGAA TTGTCGACGATTTGAGCGTTGTTAAGGATATGGTTGGGGTAACAAATACACATAAACCCAATCAAGAGAATTTTGCTTCC TATCGAGAATTGCTACCAATTTGGATTAGATTAACAGATGAATTATCTGGAGAATACGATAGTATTGCAAAATTTCAAAG AAATCATCCTAATGAACATGCAAAAATAGCTGAAGAAGATTAA
Upstream 100 bases:
>100_bases CTGAAGAAGATGATACGATGACAGGAAAAGTAGTATCTGCCTTAAGAAATGGTTTTGGCGGACATAAAGTTGATCATAAA GAATAGTTGAGGTACAGAAT
Downstream 100 bases:
>100_bases AGAGACGATCAACGGTCTTTTTAATTTAATAGCAAAAAGAAAGCGGTTACTTAGATGGGGGCGTGTTATTTATGGAAATT ATGGTCTTAGTTATTGGAAT
Product: gluconate kinase
Products: NA
Alternate protein names: Gluconate kinase [H]
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MDYMIGVDLGTTSTKVVLFDMKGNSIAYANNPYPLYQDSPDMAEEDPAEIFEAVINGLTEVMRKGNVKNGELKGVSFSSA MHSLILMDKDNHPLTRVITWADNRSSKYAEELKDNGLGQQLYAHTGVPTHPMSPLVKLIWLKNEQPEIFKKATHFIGIKD YVLFRLYGKYVQDYSLANATGLFNIFTMDWDEQALEITGVTRDQLPELVSPEYQLTGLAKSYAEVTGIPEDTPFIMGASD GTLSNLGVNAIEPGVLAVTIGTSGAVRVVVDKPVVDPRGRLFTYYLDDGKWVVGGPVNNGGIVFRWVRDQLFSPEKITAE QMQVNSYEILTDIASKIPAGADGLLFHPYLGGERAPIWDANARGSFFGLTRQHTRAHMVRAALEGIVYNLYMVMLMIEGV AGKPKSIQATGGFARSALWRQMLADIFEQDVNIPESFESSALGAVVIGMKSLGIVDDLSVVKDMVGVTNTHKPNQENFAS YRELLPIWIRLTDELSGEYDSIAKFQRNHPNEHAKIAEED
Sequences:
>Translated_520_residues MDYMIGVDLGTTSTKVVLFDMKGNSIAYANNPYPLYQDSPDMAEEDPAEIFEAVINGLTEVMRKGNVKNGELKGVSFSSA MHSLILMDKDNHPLTRVITWADNRSSKYAEELKDNGLGQQLYAHTGVPTHPMSPLVKLIWLKNEQPEIFKKATHFIGIKD YVLFRLYGKYVQDYSLANATGLFNIFTMDWDEQALEITGVTRDQLPELVSPEYQLTGLAKSYAEVTGIPEDTPFIMGASD GTLSNLGVNAIEPGVLAVTIGTSGAVRVVVDKPVVDPRGRLFTYYLDDGKWVVGGPVNNGGIVFRWVRDQLFSPEKITAE QMQVNSYEILTDIASKIPAGADGLLFHPYLGGERAPIWDANARGSFFGLTRQHTRAHMVRAALEGIVYNLYMVMLMIEGV AGKPKSIQATGGFARSALWRQMLADIFEQDVNIPESFESSALGAVVIGMKSLGIVDDLSVVKDMVGVTNTHKPNQENFAS YRELLPIWIRLTDELSGEYDSIAKFQRNHPNEHAKIAEED >Mature_520_residues MDYMIGVDLGTTSTKVVLFDMKGNSIAYANNPYPLYQDSPDMAEEDPAEIFEAVINGLTEVMRKGNVKNGELKGVSFSSA MHSLILMDKDNHPLTRVITWADNRSSKYAEELKDNGLGQQLYAHTGVPTHPMSPLVKLIWLKNEQPEIFKKATHFIGIKD YVLFRLYGKYVQDYSLANATGLFNIFTMDWDEQALEITGVTRDQLPELVSPEYQLTGLAKSYAEVTGIPEDTPFIMGASD GTLSNLGVNAIEPGVLAVTIGTSGAVRVVVDKPVVDPRGRLFTYYLDDGKWVVGGPVNNGGIVFRWVRDQLFSPEKITAE QMQVNSYEILTDIASKIPAGADGLLFHPYLGGERAPIWDANARGSFFGLTRQHTRAHMVRAALEGIVYNLYMVMLMIEGV AGKPKSIQATGGFARSALWRQMLADIFEQDVNIPESFESSALGAVVIGMKSLGIVDDLSVVKDMVGVTNTHKPNQENFAS YRELLPIWIRLTDELSGEYDSIAKFQRNHPNEHAKIAEED
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI42794763, Length=460, Percent_Identity=26.7391304347826, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI189409120, Length=459, Percent_Identity=26.5795206971678, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI4504007, Length=459, Percent_Identity=26.5795206971678, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI41393575, Length=449, Percent_Identity=26.0579064587973, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI88196792, Length=525, Percent_Identity=20.7619047619048, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI164663828, Length=554, Percent_Identity=24.0072202166065, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI164663830, Length=578, Percent_Identity=23.5294117647059, Blast_Score=84, Evalue=5e-16, Organism=Escherichia coli, GI1789987, Length=494, Percent_Identity=26.7206477732794, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1787789, Length=503, Percent_Identity=26.6401590457256, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1790361, Length=492, Percent_Identity=25, Blast_Score=158, Evalue=9e-40, Organism=Escherichia coli, GI1790005, Length=504, Percent_Identity=24.6031746031746, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1789168, Length=467, Percent_Identity=23.5546038543897, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1789138, Length=501, Percent_Identity=22.5548902195609, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17535599, Length=464, Percent_Identity=25, Blast_Score=125, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6321755, Length=430, Percent_Identity=23.953488372093, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6320314, Length=526, Percent_Identity=22.4334600760456, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI17864214, Length=477, Percent_Identity=25.3668763102725, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24656367, Length=529, Percent_Identity=22.4952741020794, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24654573, Length=404, Percent_Identity=25.990099009901, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI21357867, Length=541, Percent_Identity=21.2569316081331, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24655555, Length=430, Percent_Identity=23.4883720930233, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24655560, Length=430, Percent_Identity=23.4883720930233, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24655570, Length=430, Percent_Identity=23.4883720930233, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24655574, Length=430, Percent_Identity=23.4883720930233, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24655565, Length=430, Percent_Identity=23.4883720930233, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24656372, Length=346, Percent_Identity=25.4335260115607, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24652871, Length=439, Percent_Identity=22.0956719817768, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI19922058, Length=439, Percent_Identity=22.0956719817768, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI45552909, Length=240, Percent_Identity=25.4166666666667, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR006002 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 57556; Mature: 57556
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYMIGVDLGTTSTKVVLFDMKGNSIAYANNPYPLYQDSPDMAEEDPAEIFEAVINGLTE CCEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VMRKGNVKNGELKGVSFSSAMHSLILMDKDNHPLTRVITWADNRSSKYAEELKDNGLGQQ HHHCCCCCCCCCCCEEHHHHHCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCH LYAHTGVPTHPMSPLVKLIWLKNEQPEIFKKATHFIGIKDYVLFRLYGKYVQDYSLANAT HHHCCCCCCCCHHHHHEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC GLFNIFTMDWDEQALEITGVTRDQLPELVSPEYQLTGLAKSYAEVTGIPEDTPFIMGASD CEEEEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC GTLSNLGVNAIEPGVLAVTIGTSGAVRVVVDKPVVDPRGRLFTYYLDDGKWVVGGPVNNG CCHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEECCCCCCC GIVFRWVRDQLFSPEKITAEQMQVNSYEILTDIASKIPAGADGLLFHPYLGGERAPIWDA CEEEEEEHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC NARGSFFGLTRQHTRAHMVRAALEGIVYNLYMVMLMIEGVAGKPKSIQATGGFARSALWR CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHH QMLADIFEQDVNIPESFESSALGAVVIGMKSLGIVDDLSVVKDMVGVTNTHKPNQENFAS HHHHHHHHHCCCCCCHHHCCCCCEEEECHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH YRELLPIWIRLTDELSGEYDSIAKFQRNHPNEHAKIAEED HHHHHHEEEEEEHHHCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDYMIGVDLGTTSTKVVLFDMKGNSIAYANNPYPLYQDSPDMAEEDPAEIFEAVINGLTE CCEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VMRKGNVKNGELKGVSFSSAMHSLILMDKDNHPLTRVITWADNRSSKYAEELKDNGLGQQ HHHCCCCCCCCCCCEEHHHHHCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCH LYAHTGVPTHPMSPLVKLIWLKNEQPEIFKKATHFIGIKDYVLFRLYGKYVQDYSLANAT HHHCCCCCCCCHHHHHEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC GLFNIFTMDWDEQALEITGVTRDQLPELVSPEYQLTGLAKSYAEVTGIPEDTPFIMGASD CEEEEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCC GTLSNLGVNAIEPGVLAVTIGTSGAVRVVVDKPVVDPRGRLFTYYLDDGKWVVGGPVNNG CCHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEECCCCCCC GIVFRWVRDQLFSPEKITAEQMQVNSYEILTDIASKIPAGADGLLFHPYLGGERAPIWDA CEEEEEEHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCC NARGSFFGLTRQHTRAHMVRAALEGIVYNLYMVMLMIEGVAGKPKSIQATGGFARSALWR CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHH QMLADIFEQDVNIPESFESSALGAVVIGMKSLGIVDDLSVVKDMVGVTNTHKPNQENFAS HHHHHHHHHCCCCCCHHHCCCCCEEEECHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH YRELLPIWIRLTDELSGEYDSIAKFQRNHPNEHAKIAEED HHHHHHEEEEEEHHHCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8535972 [H]