| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is fba [H]
Identifier: 116493098
GI number: 116493098
Start: 1338606
End: 1339469
Strand: Direct
Name: fba [H]
Synonym: PEPE_1352
Alternate gene names: 116493098
Gene position: 1338606-1339469 (Clockwise)
Preceding gene: 116493088
Following gene: 116493104
Centisome position: 73.05
GC content: 40.97
Gene sequence:
>864_bases ATGTCATTTATTAATGGTACATCAACATTTGCAGCAGCTCGTAAGGGTGGATACGCTGTAGGTGCTTTTAACACAAACAA CCTTGAATGGACTCGTGCTATCTTAGCTGCAGGCCAAGAAACACACACACCTATCTTGATCCAATCATCAATGGGTGCTG CTAAGTACATGGGTGGTTACAAAGCTGTTAAGAACCTCGTTGAAAAACAAGTAGAATCAATGGGTATCACAGTTCCTGTT ATCATGCATTTAGACCATGGTAACTACGAAGCTGCTAAAGAAGCTATCGCTGCTGGATACAGTTCAGTTATGTTTGATGG TCATGATCTTGACTTTGAAGATAACCTTCTAAAGACAAAAGAAATCGTTGCTTTGGCACATGCTCAAGGCGTATCAGTTG AAGCTGAAGTTGGCTCAATTGGTGGTGAAGAAGACGGTATCGTTGGTGCTGGTGAATTAGCTGATGTTGAAGAAGCTAAA CAACTTGCTGCTACAGGCGTTGACTTCCTTGCTGTTGGTATTGGTAACATCCATGGTGTATACCCTGCTAACTGGACTGG TTTAAACTTTGACCGTCTACAAGAACTTGCTGATGTTATTAAGACACCACTTGTACTTCATGGTGGTTCAGGAATTCCTA AGGAACAAATCGTTAAGGCTATTTCAATGGGTATTTCTAAGGTTAACGTTAACACAGAACAACAAATTGCTTGGTCAAAC GCTGTTCGTAAATACTACGAAGCAGACAATGACAAGAAAGCTAAAGGATTCGATCCTCGTAAAGTTCTTGCTTCAGGTAC AGAAGCTATCAAGAACACTGTTAAGGAACGTATCGAATGGTTCAACACACCATCAATGTGGTAA
Upstream 100 bases:
>100_bases AAAAACTCGTATAATATTTTTTAATTTTGTGATAAAATAGATGTGTTGCGAAGAGAAAAGCTCTTTGTTTGTATAAACAA TATTGGGAGGAACCAGTTTT
Downstream 100 bases:
>100_bases GATGATCCATGAAAAAAGCTTGGCTTAATGGCCAAGCTTTTTTTGTTGCTCTGGAAAATGTAATTTAAAAGTTGTTCCTT TTTCTGGAGTACTCTCGACA
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSFINGTSTFAAARKGGYAVGAFNTNNLEWTRAILAAGQETHTPILIQSSMGAAKYMGGYKAVKNLVEKQVESMGITVPV IMHLDHGNYEAAKEAIAAGYSSVMFDGHDLDFEDNLLKTKEIVALAHAQGVSVEAEVGSIGGEEDGIVGAGELADVEEAK QLAATGVDFLAVGIGNIHGVYPANWTGLNFDRLQELADVIKTPLVLHGGSGIPKEQIVKAISMGISKVNVNTEQQIAWSN AVRKYYEADNDKKAKGFDPRKVLASGTEAIKNTVKERIEWFNTPSMW
Sequences:
>Translated_287_residues MSFINGTSTFAAARKGGYAVGAFNTNNLEWTRAILAAGQETHTPILIQSSMGAAKYMGGYKAVKNLVEKQVESMGITVPV IMHLDHGNYEAAKEAIAAGYSSVMFDGHDLDFEDNLLKTKEIVALAHAQGVSVEAEVGSIGGEEDGIVGAGELADVEEAK QLAATGVDFLAVGIGNIHGVYPANWTGLNFDRLQELADVIKTPLVLHGGSGIPKEQIVKAISMGISKVNVNTEQQIAWSN AVRKYYEADNDKKAKGFDPRKVLASGTEAIKNTVKERIEWFNTPSMW >Mature_286_residues SFINGTSTFAAARKGGYAVGAFNTNNLEWTRAILAAGQETHTPILIQSSMGAAKYMGGYKAVKNLVEKQVESMGITVPVI MHLDHGNYEAAKEAIAAGYSSVMFDGHDLDFEDNLLKTKEIVALAHAQGVSVEAEVGSIGGEEDGIVGAGELADVEEAKQ LAATGVDFLAVGIGNIHGVYPANWTGLNFDRLQELADVIKTPLVLHGGSGIPKEQIVKAISMGISKVNVNTEQQIAWSNA VRKYYEADNDKKAKGFDPRKVLASGTEAIKNTVKERIEWFNTPSMW
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=283, Percent_Identity=36.7491166077738, Blast_Score=173, Evalue=1e-44, Organism=Escherichia coli, GI87082041, Length=273, Percent_Identity=35.5311355311355, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1788072, Length=232, Percent_Identity=37.5, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789293, Length=334, Percent_Identity=24.8502994011976, Blast_Score=88, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011289 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 30786; Mature: 30655
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFINGTSTFAAARKGGYAVGAFNTNNLEWTRAILAAGQETHTPILIQSSMGAAKYMGGY CCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHH KAVKNLVEKQVESMGITVPVIMHLDHGNYEAAKEAIAAGYSSVMFDGHDLDFEDNLLKTK HHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHH EIVALAHAQGVSVEAEVGSIGGEEDGIVGAGELADVEEAKQLAATGVDFLAVGIGNIHGV HHHHHHHCCCCEEEEHHCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHEEEECCCCCCC YPANWTGLNFDRLQELADVIKTPLVLHGGSGIPKEQIVKAISMGISKVNVNTEQQIAWSN CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCHHEECCCCHHHHHHHH AVRKYYEADNDKKAKGFDPRKVLASGTEAIKNTVKERIEWFNTPSMW HHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SFINGTSTFAAARKGGYAVGAFNTNNLEWTRAILAAGQETHTPILIQSSMGAAKYMGGY CCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHH KAVKNLVEKQVESMGITVPVIMHLDHGNYEAAKEAIAAGYSSVMFDGHDLDFEDNLLKTK HHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCHHHEECCCCCCCCCCHHHHH EIVALAHAQGVSVEAEVGSIGGEEDGIVGAGELADVEEAKQLAATGVDFLAVGIGNIHGV HHHHHHHCCCCEEEEHHCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHEEEECCCCCCC YPANWTGLNFDRLQELADVIKTPLVLHGGSGIPKEQIVKAISMGISKVNVNTEQQIAWSN CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCHHEECCCCHHHHHHHH AVRKYYEADNDKKAKGFDPRKVLASGTEAIKNTVKERIEWFNTPSMW HHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]