Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493092

Identifier: 116493092

GI number: 116493092

Start: 1332234

End: 1332563

Strand: Reverse

Name: 116493092

Synonym: PEPE_1346

Alternate gene names: NA

Gene position: 1332563-1332234 (Counterclockwise)

Preceding gene: 116493093

Following gene: 116493091

Centisome position: 72.72

GC content: 34.24

Gene sequence:

>330_bases
ATGGGCAACAAAGATCATGAAAAACGTTTTTTGCTTCGTTTAGATCAAAAACTTTATGAAAGACTTCAATCGGAAGCGGA
TGAACAAGGACGAAGTGTTAATGCACATATCGTTAATATCTTAAATAGAACTAACACGCCAGCGACCTTTGAGAAACGCC
AAATTATTGGAAAAGTCATTGCAGGTAAAGATTTAAGTCAGAGTGGACTAGTATTAGTTTCAGGAATTTATTACAGATAT
TTACTTGATGATAATGGTAATGTGGTCGAAGACGCCCAATATGCCATCATTGAAGCAAATGGAAATATCTTAACTTTAAG
AAGAATATAG

Upstream 100 bases:

>100_bases
AATAAGGGATCATTTTTTTATTGACAGAAGTAATATCTAAGACTACACTTTAACCATAATATATTAATGATATTGTTTTG
ATATCACGAAAGGAGTTAAG

Downstream 100 bases:

>100_bases
GGGGAATATTTGATGTTAGGTATTAAAATCGTTCCGCAAAATAACCAGGGTTTAGTTGAGACGTTAGGAAAGTATAGTCA
TAGTGTAGAATCAGGGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MGNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVIAGKDLSQSGLVLVSGIYYRY
LLDDNGNVVEDAQYAIIEANGNILTLRRI

Sequences:

>Translated_109_residues
MGNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVIAGKDLSQSGLVLVSGIYYRY
LLDDNGNVVEDAQYAIIEANGNILTLRRI
>Mature_108_residues
GNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVIAGKDLSQSGLVLVSGIYYRYL
LDDNGNVVEDAQYAIIEANGNILTLRRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12401; Mature: 12270

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCCCCHHHHHHHHHHH
AGKDLSQSGLVLVSGIYYRYLLDDNGNVVEDAQYAIIEANGNILTLRRI
CCCCCCCCCEEEEEEEEEEEEECCCCCEECCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure 
GNKDHEKRFLLRLDQKLYERLQSEADEQGRSVNAHIVNILNRTNTPATFEKRQIIGKVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCCCCHHHHHHHHHHH
AGKDLSQSGLVLVSGIYYRYLLDDNGNVVEDAQYAIIEANGNILTLRRI
CCCCCCCCCEEEEEEEEEEEEECCCCCEECCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA