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The map label for this gene is yidD [C]

Identifier: 116493062

GI number: 116493062

Start: 1304813

End: 1305070

Strand: Reverse

Name: yidD [C]

Synonym: PEPE_1314

Alternate gene names: 116493062

Gene position: 1305070-1304813 (Counterclockwise)

Preceding gene: 116493063

Following gene: 116493061

Centisome position: 71.22

GC content: 37.6

Gene sequence:

>258_bases
ATGAAGCAAATTTTGTTACTGATTATTCGTGGGTATCAAAAATTTATCTCGCCAATGTTTCCGCCATCTTGTCGATATTA
TCCAACTTGTTCTAATTATAGCCTCCAAGCCATCAAACGATTTGGTGCCATAAAAGGCGGCTTGATGGGGGTTGCAAGAA
TTTTAAGGTGTCATCCATTTGTGCGAGGCGGATACGATCCAGTGCCAGATAATTTTTCTTTAAAACGCAATCAAAAAAAT
AGTAAACCAAGAAATTAG

Upstream 100 bases:

>100_bases
TGTCTGTGGTTATTGGATATACGGTAAGTAGTTTTTTCTTAAATTTAATTACAACGATTGAAAATTTAACATTTTTAGTC
AAATAGGGGATTAAACCTAA

Downstream 100 bases:

>100_bases
GAGTTAAAATGTCTAGAAGAGAGAAAAAGTTCGAAATCGAAATTAAAGAAGTTAAAGAAAATGATTCAGTTATCAATGAG
GTTTATATCAACAGACAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKQILLLIIRGYQKFISPMFPPSCRYYPTCSNYSLQAIKRFGAIKGGLMGVARILRCHPFVRGGYDPVPDNFSLKRNQKN
SKPRN

Sequences:

>Translated_85_residues
MKQILLLIIRGYQKFISPMFPPSCRYYPTCSNYSLQAIKRFGAIKGGLMGVARILRCHPFVRGGYDPVPDNFSLKRNQKN
SKPRN
>Mature_85_residues
MKQILLLIIRGYQKFISPMFPPSCRYYPTCSNYSLQAIKRFGAIKGGLMGVARILRCHPFVRGGYDPVPDNFSLKRNQKN
SKPRN

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=68, Percent_Identity=51.4705882352941, Blast_Score=84, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1314_PEDPA (Q03EL7)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804797.1
- STRING:   Q03EL7
- GeneID:   4417569
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1314
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   HPERYED
- ProtClustDB:   CLSK2516727
- BioCyc:   PPEN278197:PEPE_1314-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9765; Mature: 9765

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILLLIIRGYQKFISPMFPPSCRYYPTCSNYSLQAIKRFGAIKGGLMGVARILRCHPF
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCH
VRGGYDPVPDNFSLKRNQKNSKPRN
HCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQILLLIIRGYQKFISPMFPPSCRYYPTCSNYSLQAIKRFGAIKGGLMGVARILRCHPF
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCH
VRGGYDPVPDNFSLKRNQKNSKPRN
HCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA