| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493063
Identifier: 116493063
GI number: 116493063
Start: 1305085
End: 1305309
Strand: Reverse
Name: 116493063
Synonym: PEPE_1315
Alternate gene names: NA
Gene position: 1305309-1305085 (Counterclockwise)
Preceding gene: 116493064
Following gene: 116493062
Centisome position: 71.24
GC content: 28.0
Gene sequence:
>225_bases ATGTTAGGAATTCAATCTGTAATAACTTTAATTTGTTATCTATTTTTCATCCTGATTTCCTTTTGGAGTATTCAGGCTAT TCCATTTCATAAATTTATGGGAAGATATGAGAATCAAGCACGGGTTTTAATCGTATTGCTGTCTGTGGTTATTGGATATA CGGTAAGTAGTTTTTTCTTAAATTTAATTACAACGATTGAAAATTTAACATTTTTAGTCAAATAG
Upstream 100 bases:
>100_bases AAAAACGCTCAATTTTGAGCGTTTTTTTTGTGTTTAAAAATGATAAATTTAGCTTAGTTTCTGGTACAATAATACATGTA TGAAATTTTGGAGGAAAATT
Downstream 100 bases:
>100_bases GGGATTAAACCTAAATGAAGCAAATTTTGTTACTGATTATTCGTGGGTATCAAAAATTTATCTCGCCAATGTTTCCGCCA TCTTGTCGATATTATCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MLGIQSVITLICYLFFILISFWSIQAIPFHKFMGRYENQARVLIVLLSVVIGYTVSSFFLNLITTIENLTFLVK
Sequences:
>Translated_74_residues MLGIQSVITLICYLFFILISFWSIQAIPFHKFMGRYENQARVLIVLLSVVIGYTVSSFFLNLITTIENLTFLVK >Mature_74_residues MLGIQSVITLICYLFFILISFWSIQAIPFHKFMGRYENQARVLIVLLSVVIGYTVSSFFLNLITTIENLTFLVK
Specific function: Unknown
COG id: COG4836
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8550; Mature: 8550
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIQSVITLICYLFFILISFWSIQAIPFHKFMGRYENQARVLIVLLSVVIGYTVSSFFL CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NLITTIENLTFLVK HHHHHHHHHHHHCC >Mature Secondary Structure MLGIQSVITLICYLFFILISFWSIQAIPFHKFMGRYENQARVLIVLLSVVIGYTVSSFFL CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NLITTIENLTFLVK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA