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The map label for this gene is 116493002

Identifier: 116493002

GI number: 116493002

Start: 1240677

End: 1241090

Strand: Reverse

Name: 116493002

Synonym: PEPE_1254

Alternate gene names: NA

Gene position: 1241090-1240677 (Counterclockwise)

Preceding gene: 116493004

Following gene: 116493001

Centisome position: 67.73

GC content: 38.16

Gene sequence:

>414_bases
TTGACAGGAGGCGGAATTGCTGCAATTATTGCTGCAGTAGCATTGCTTATTTTAGTTCTATTCATTGGATTAGTATTAGT
GAATGCTTCTAAAACATTATCAGAGATTAATCGTAGTATGGCAGTGATCACACGGGATGTTGATCTTATATCACATGAAG
CTGAAGGTATTATGGCAAATGCGAACGAACTTTTAGAAGATGTTAACGGAAAAGTCGCTACCATCGATCCATTGTTCCAA
GCAGTTGCTGACTTGAGTGAAAGTACATCGGATTTAAACCAAGCAACTCGTCGTTTAGCTGGTCGGGTAAACCATACTGG
AAAAAGCAAGAATACCGGTAAAGTAGCCACAGCCATGAATGTTGGTAAAGGTGCTATGAATATGTATAAGAACCATAAAG
TTAAGAATAAATAG

Upstream 100 bases:

>100_bases
CTATTCTAACAGAATTTTGTAGCGAATAAGTAGGGGTTTTAATTGCACTTAATTATTTGTAATGCTATTCTGTAGTCATA
AACGAACAGGAGGGGATCAT

Downstream 100 bases:

>100_bases
GGGGCTATCAGTATGTCAAAGAGTAGTTTTTTACTAGGTGTAATCTTGGGTGGAGCAGCTGCTACTGCAGCAGCAATTAA
GTTAACAGATACAACACCTC

Product: methyl-accepting chemotaxis-like protein

Products: NA

Alternate protein names: Extracellular Protein; Tropomyosin; TMnm Related Protein; Methyl-Accepting Chemotaxis-Like Domain-Containing Protein; Exported Protein; Methyl-Accepting Chemotaxis Protein; Ypothetical Protein SMU.

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTGGGIAAIIAAVALLILVLFIGLVLVNASKTLSEINRSMAVITRDVDLISHEAEGIMANANELLEDVNGKVATIDPLFQ
AVADLSESTSDLNQATRRLAGRVNHTGKSKNTGKVATAMNVGKGAMNMYKNHKVKNK

Sequences:

>Translated_137_residues
MTGGGIAAIIAAVALLILVLFIGLVLVNASKTLSEINRSMAVITRDVDLISHEAEGIMANANELLEDVNGKVATIDPLFQ
AVADLSESTSDLNQATRRLAGRVNHTGKSKNTGKVATAMNVGKGAMNMYKNHKVKNK
>Mature_136_residues
TGGGIAAIIAAVALLILVLFIGLVLVNASKTLSEINRSMAVITRDVDLISHEAEGIMANANELLEDVNGKVATIDPLFQA
VADLSESTSDLNQATRRLAGRVNHTGKSKNTGKVATAMNVGKGAMNMYKNHKVKNK

Specific function: Unknown

COG id: COG4768

COG function: function code R; Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14443; Mature: 14312

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGGIAAIIAAVALLILVLFIGLVLVNASKTLSEINRSMAVITRDVDLISHEAEGIMAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ANELLEDVNGKVATIDPLFQAVADLSESTSDLNQATRRLAGRVNHTGKSKNTGKVATAMN
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VGKGAMNMYKNHKVKNK
HCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TGGGIAAIIAAVALLILVLFIGLVLVNASKTLSEINRSMAVITRDVDLISHEAEGIMAN
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ANELLEDVNGKVATIDPLFQAVADLSESTSDLNQATRRLAGRVNHTGKSKNTGKVATAMN
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VGKGAMNMYKNHKVKNK
HCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA