The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is 116492977

Identifier: 116492977

GI number: 116492977

Start: 1218949

End: 1219557

Strand: Reverse

Name: 116492977

Synonym: PEPE_1229

Alternate gene names: NA

Gene position: 1219557-1218949 (Counterclockwise)

Preceding gene: 116492978

Following gene: 116492976

Centisome position: 66.56

GC content: 32.02

Gene sequence:

>609_bases
TTGAAATTTTTCACCTCGGATACACACTTTTTTCATAAAGAATTGTTAAAAGATAAAGACTTTGCTCCACGCGATTTTGA
CAATATCGAAGATATGCATGCAGCAATCATTAAAAATTGGAATGATCGAGTGACCGATCGGGATACGGTGTATCACTTAG
GGGATGTGGCTTTGAATTTTGTGAGACCTGAAAAAAGGGCTAACGAACAAATATTCAGATTATTGAATTCTTTAAATGGT
CACATTGTTTTAATTAAAGGGAACCATGACGCACGAAGTTTATTCAAATATCTTCAAGCTAATAATTATTTGTTAAATGG
ACAATCTAAATTTCAATTTCATGATGTGGGTACTATCATTAAGATGAATCATCGCCAATTAATAATGAGTCATTATCCGA
TAATGTTAGGAATTGTAAAACAGGTAATTAATTTACATGGTCATATCCACCATTACAGCGTAAATATTAAGGAAAATATT
AATGTGGGTGTGGATACTCCTGAAAAAGATTATTTAGATTATGCGATTCCATTTGGAGCGCCATTTTCAGAATCTGACAT
AGAACAAATCATCAATGGTAAGAAAATTGATTTTCAAAAAAGGAAGTAG

Upstream 100 bases:

>100_bases
TATTGCAAAAGGAAACAGCGATTGCTTTAATTGGATCATTAATTTGGTTCGGTGTAATGTTTACGGTAGCGAAAATTAAG
GGAAAAGGGGAGCTAATGGA

Downstream 100 bases:

>100_bases
GCGTTGACCTTTCTTCTTTTTTTATTTAGGATAAGTTTTATATTGATGAGTGGAGAATTTAGATGAGTAAGAAAACAAAT
GAAGAATTATCTGAAATGAG

Product: phosphoesterase or phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNFVRPEKRANEQIFRLLNSLNG
HIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTIIKMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENI
NVGVDTPEKDYLDYAIPFGAPFSESDIEQIINGKKIDFQKRK

Sequences:

>Translated_202_residues
MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNFVRPEKRANEQIFRLLNSLNG
HIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTIIKMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENI
NVGVDTPEKDYLDYAIPFGAPFSESDIEQIINGKKIDFQKRK
>Mature_202_residues
MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNFVRPEKRANEQIFRLLNSLNG
HIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTIIKMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENI
NVGVDTPEKDYLDYAIPFGAPFSESDIEQIINGKKIDFQKRK

Specific function: Unknown

COG id: COG4186

COG function: function code R; Predicted phosphoesterase or phosphohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 23645; Mature: 23645

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNF
CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
VRPEKRANEQIFRLLNSLNGHIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTII
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCEEEECCCEEE
KMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENINVGVDTPEKDYLDYAIPFGA
EECHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCEECCCCCCCCCCEEECCCCC
PFSESDIEQIINGKKIDFQKRK
CCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKFFTSDTHFFHKELLKDKDFAPRDFDNIEDMHAAIIKNWNDRVTDRDTVYHLGDVALNF
CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
VRPEKRANEQIFRLLNSLNGHIVLIKGNHDARSLFKYLQANNYLLNGQSKFQFHDVGTII
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEECCCCCEEEECCCEEE
KMNHRQLIMSHYPIMLGIVKQVINLHGHIHHYSVNIKENINVGVDTPEKDYLDYAIPFGA
EECHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCEECCCCCCCCCCEEECCCCC
PFSESDIEQIINGKKIDFQKRK
CCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]