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The map label for this gene is ydbI [H]

Identifier: 116492928

GI number: 116492928

Start: 1166616

End: 1167668

Strand: Reverse

Name: ydbI [H]

Synonym: PEPE_1167

Alternate gene names: 116492928

Gene position: 1167668-1166616 (Counterclockwise)

Preceding gene: 116492929

Following gene: 116492927

Centisome position: 63.72

GC content: 34.09

Gene sequence:

>1053_bases
ATGGATATATTAGTTCAACAATGGCATAAAAAATCTGTTCAACTTTGGGCAACGCTAGTAGCGCTAATATTGATAATATT
TTTATTAAGAGATTTTATGTCGCAAATTTTATTGGTAGTAATTTTTTCCTTTGTGTCACACGTGGGAATTCAAAAGATTA
GAAAATACACCAAGGTTAGTCAGCCAATTGGTACAATAATTTTTTATATTGTTTTACTGGCCTTTGCGGGCTTTGTTTTT
TCTTTTACGGCCTCGATGATTTATGATCAATTAAAAGGAATTCCTTCTTTAATTAAACATGCTATTGACAGTGATACGTT
TAGTAACCACTATGTTCAAACAATCCTTACTGAGATAAATAGAAACTCACAAGCGGTGAAAGGAAGTCAATACATCGCAA
TGTCTGGGTTAAATCAGCTTGGCAGGATCGGGATTGCTGCGGAACACGTTATAATTGCGTTATTTCTAAGTATGGTATTT
AATTTAACTTACAACCATTTACGTGAATTTGGGCATGCTATTTTAAAGAGTAAGTATGATATCATGTTCGGAAATGTATA
CTACTTACTTCGTAAGTACGTAGTGATACTAGGTACGGTAATTGAAACCCAATTAGTAATTTGTATTATCAATACCGGTT
TGATGGTGATTGGTTTATGGATAATTGGGGTGCCTAAACTACTATTAATGGCTATTATTGTCTTTGTTCTAGGTTTAGTC
CCCGTTGCTGGAGTTTTAATTTCATTAATCCCCTTGTCAATTGTTGCTTTTTCGGCCAATGGTATTATCTCAATTGCAGA
AGTGCTTTGTTTAGTAATATTGATACACTTTTTTGAATCATACTTTCTACACCCAAGATTGATGGCGGGTGCCACTGATT
TGCCGGTCTTTGTAACCTTCATTACTTTAATTATTGGAGCAAAAATGTTGGGAACTTGGGGGTTGATTGTTGGTATTCCT
ACCGTCGCTTTCTTCATTGATTTATTAGGAATTCAATTAAAGCAGCATCATCCTAGAAACCCTAAAGAAGTTATTGAAAG
TGAAATTGAATAA

Upstream 100 bases:

>100_bases
CCAAAAATAATTAAATAAGTGTTAAATAACTTTTTAAATTTTCGATTAAGATCTGTTGCAGATTATAATTTGTGCAGGTC
TTTTTATTTGGAGGAATTCA

Downstream 100 bases:

>100_bases
TTTAGAAGTCGTCTATCAAGTGATAGGCGTCTTTTTTTGATGTAAAATGAACGAAATTGAATTTTTTTGAATTAATTTGA
TTGATTTTGAACTAAAATGA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MDILVQQWHKKSVQLWATLVALILIIFLLRDFMSQILLVVIFSFVSHVGIQKIRKYTKVSQPIGTIIFYIVLLAFAGFVF
SFTASMIYDQLKGIPSLIKHAIDSDTFSNHYVQTILTEINRNSQAVKGSQYIAMSGLNQLGRIGIAAEHVIIALFLSMVF
NLTYNHLREFGHAILKSKYDIMFGNVYYLLRKYVVILGTVIETQLVICIINTGLMVIGLWIIGVPKLLLMAIIVFVLGLV
PVAGVLISLIPLSIVAFSANGIISIAEVLCLVILIHFFESYFLHPRLMAGATDLPVFVTFITLIIGAKMLGTWGLIVGIP
TVAFFIDLLGIQLKQHHPRNPKEVIESEIE

Sequences:

>Translated_350_residues
MDILVQQWHKKSVQLWATLVALILIIFLLRDFMSQILLVVIFSFVSHVGIQKIRKYTKVSQPIGTIIFYIVLLAFAGFVF
SFTASMIYDQLKGIPSLIKHAIDSDTFSNHYVQTILTEINRNSQAVKGSQYIAMSGLNQLGRIGIAAEHVIIALFLSMVF
NLTYNHLREFGHAILKSKYDIMFGNVYYLLRKYVVILGTVIETQLVICIINTGLMVIGLWIIGVPKLLLMAIIVFVLGLV
PVAGVLISLIPLSIVAFSANGIISIAEVLCLVILIHFFESYFLHPRLMAGATDLPVFVTFITLIIGAKMLGTWGLIVGIP
TVAFFIDLLGIQLKQHHPRNPKEVIESEIE
>Mature_350_residues
MDILVQQWHKKSVQLWATLVALILIIFLLRDFMSQILLVVIFSFVSHVGIQKIRKYTKVSQPIGTIIFYIVLLAFAGFVF
SFTASMIYDQLKGIPSLIKHAIDSDTFSNHYVQTILTEINRNSQAVKGSQYIAMSGLNQLGRIGIAAEHVIIALFLSMVF
NLTYNHLREFGHAILKSKYDIMFGNVYYLLRKYVVILGTVIETQLVICIINTGLMVIGLWIIGVPKLLLMAIIVFVLGLV
PVAGVLISLIPLSIVAFSANGIISIAEVLCLVILIHFFESYFLHPRLMAGATDLPVFVTFITLIIGAKMLGTWGLIVGIP
TVAFFIDLLGIQLKQHHPRNPKEVIESEIE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39085; Mature: 39085

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]