Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is 116492894

Identifier: 116492894

GI number: 116492894

Start: 1132632

End: 1132922

Strand: Direct

Name: 116492894

Synonym: PEPE_1133

Alternate gene names: NA

Gene position: 1132632-1132922 (Clockwise)

Preceding gene: 116492888

Following gene: 116492899

Centisome position: 61.81

GC content: 30.93

Gene sequence:

>291_bases
TTGAATTTAAATAATTTCATAAAATCAACGGCCGAATTACGTTCCCACTTAATTCTTAAGGGGGATCAAGAACAATTATT
TTTTGTTTCAGGAATCATCGTTAATACCCTTCAAAAAGAAATATTGCTTACATTAACTTTAAATCCTCATCGGTTTCCCC
TTAGTCAATTTCGAACCAAAACTATTGAAGCACCAAGAGAAGCTAAAATATTATTGTTCAACCCCGAAACCAAACTAAAA
ACTCATACATTTGGATATTATCTACGTGATCAATATCTAGTAATCAAGTAA

Upstream 100 bases:

>100_bases
AACAATCCATTTTACAATACTTTTAATTGTATCACTAGCATCGACTATAATTCTAAGATATCCTTGCTATATAAGTATTA
TTAAATAAGGAGGTTTCTTT

Downstream 100 bases:

>100_bases
AAAGTCAGTGATGAGAACAGAATTGTTTAAGATTAAACATTCCTTTCTGTACTTACCACTGACTTTAATAATTTTTATTC
TACAAATTCAAATACAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNLNNFIKSTAELRSHLILKGDQEQLFFVSGIIVNTLQKEILLTLTLNPHRFPLSQFRTKTIEAPREAKILLFNPETKLK
THTFGYYLRDQYLVIK

Sequences:

>Translated_96_residues
MNLNNFIKSTAELRSHLILKGDQEQLFFVSGIIVNTLQKEILLTLTLNPHRFPLSQFRTKTIEAPREAKILLFNPETKLK
THTFGYYLRDQYLVIK
>Mature_96_residues
MNLNNFIKSTAELRSHLILKGDQEQLFFVSGIIVNTLQKEILLTLTLNPHRFPLSQFRTKTIEAPREAKILLFNPETKLK
THTFGYYLRDQYLVIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11261; Mature: 11261

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNNFIKSTAELRSHLILKGDQEQLFFVSGIIVNTLQKEILLTLTLNPHRFPLSQFRTK
CCHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHCCEEEEEEEECCCCCCHHHHHHH
TIEAPREAKILLFNPETKLKTHTFGYYLRDQYLVIK
CCCCCCCCEEEEECCCCCEEEEEEEEEEECEEEEEC
>Mature Secondary Structure
MNLNNFIKSTAELRSHLILKGDQEQLFFVSGIIVNTLQKEILLTLTLNPHRFPLSQFRTK
CCHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHCCEEEEEEEECCCCCCHHHHHHH
TIEAPREAKILLFNPETKLKTHTFGYYLRDQYLVIK
CCCCCCCCEEEEECCCCCEEEEEEEEEEECEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA