| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492899
Identifier: 116492899
GI number: 116492899
Start: 1138635
End: 1138778
Strand: Direct
Name: 116492899
Synonym: PEPE_1138
Alternate gene names: NA
Gene position: 1138635-1138778 (Clockwise)
Preceding gene: 116492894
Following gene: 116492908
Centisome position: 62.14
GC content: 25.69
Gene sequence:
>144_bases ATGGGACTCACTGTTAAAAGAAATGATAATCTCGAAAAAATGTTCGATCAATTAACAACTCAAACTAAAACTTCCGTAGA GGAAAAAGAAAAGAAAAATAAATTTCTTGCTAAAGGTACTAATAAAAAAGATTCAAAAAAATAA
Upstream 100 bases:
>100_bases TACATTAAAATATATAATATTCACTATAAATATGAATAATTTTTATTTTCTGACAAATGAAATTTTTTTTGGTATTATGG TCGGAAAGAGGTGATTAGAA
Downstream 100 bases:
>100_bases ACCACAATCATCAGCATTAATGCTGTTAATTGTGGTTTTTTATTTACTTAAAGTTGCCGGGATAACGCTTTTCAAGTGTG GCAATATTTTGTTTGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MGLTVKRNDNLEKMFDQLTTQTKTSVEEKEKKNKFLAKGTNKKDSKK
Sequences:
>Translated_47_residues MGLTVKRNDNLEKMFDQLTTQTKTSVEEKEKKNKFLAKGTNKKDSKK >Mature_46_residues GLTVKRNDNLEKMFDQLTTQTKTSVEEKEKKNKFLAKGTNKKDSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5460; Mature: 5329
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTVKRNDNLEKMFDQLTTQTKTSVEEKEKKNKFLAKGTNKKDSKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GLTVKRNDNLEKMFDQLTTQTKTSVEEKEKKNKFLAKGTNKKDSKK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA