| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492688
Identifier: 116492688
GI number: 116492688
Start: 923588
End: 924139
Strand: Direct
Name: 116492688
Synonym: PEPE_0923
Alternate gene names: NA
Gene position: 923588-924139 (Clockwise)
Preceding gene: 116492687
Following gene: 116492693
Centisome position: 50.4
GC content: 34.6
Gene sequence:
>552_bases ATGAATAAAGAACGCTTTGAGGCTTTTACGGACGCCGTAATTGCCATTATAATGACTATTTTAGTATTAGATATACATCT ACCTACAGATGATCATTCGATGCGAGCGATTATTGCCATTGCTCCTTCATTTCTTGCATATATCGTTAGTTTTACAATAC TAGCAGTCATGTGGGTTAACCATCATAATTTATTTCTTCATGTGAAAACGGTAAATCATAAAATTCTATATACCAATATA TTTCTATTGTTTTGGGCAACTTTATTACCAGCTACCACAGCTTGGTTCGGTTCAGACATCTACTCATCAACGGCAGCTTG GCTGTACGCTGTCAACGTCATTGTTTACAACATTTCTTTCTCAATGGTGAGAAATGAAGTTTTAAAAATCAATGATAGGT TGAAGCATTTATACATTACAGAGATAGCATCGCTGATTTTAAATATTATTGCATTGTTTATTGTATTCTTCTGGCCTCCC TTTATTATGATAAGTTTGTTAATGGACATTCTACTGTGGTCGATTCAACCGGTGGTTCGTCATAAAGGATAA
Upstream 100 bases:
>100_bases TGATATGTCGGCTACTAGATACTGATGGGTATTTATTGACTTAATAGACAAATGTTATAATTGTGGTATAAAAAATTGAT TAAAAAGGATGCAATTTATT
Downstream 100 bases:
>100_bases GGTGAGCTATTGATTAATGCTTAAATTAGTTGTGTTCTAATAAAATTGTTAAGATAAAAAAACTCCGCGCTGTTATTAGT GAGAATAATAACAGTACGGA
Product: integral membrane protein
Products: NA
Alternate protein names: Ferrochelatase; Ypothetical Protein SMU.
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNKERFEAFTDAVIAIIMTILVLDIHLPTDDHSMRAIIAIAPSFLAYIVSFTILAVMWVNHHNLFLHVKTVNHKILYTNI FLLFWATLLPATTAWFGSDIYSSTAAWLYAVNVIVYNISFSMVRNEVLKINDRLKHLYITEIASLILNIIALFIVFFWPP FIMISLLMDILLWSIQPVVRHKG
Sequences:
>Translated_183_residues MNKERFEAFTDAVIAIIMTILVLDIHLPTDDHSMRAIIAIAPSFLAYIVSFTILAVMWVNHHNLFLHVKTVNHKILYTNI FLLFWATLLPATTAWFGSDIYSSTAAWLYAVNVIVYNISFSMVRNEVLKINDRLKHLYITEIASLILNIIALFIVFFWPP FIMISLLMDILLWSIQPVVRHKG >Mature_183_residues MNKERFEAFTDAVIAIIMTILVLDIHLPTDDHSMRAIIAIAPSFLAYIVSFTILAVMWVNHHNLFLHVKTVNHKILYTNI FLLFWATLLPATTAWFGSDIYSSTAAWLYAVNVIVYNISFSMVRNEVLKINDRLKHLYITEIASLILNIIALFIVFFWPP FIMISLLMDILLWSIQPVVRHKG
Specific function: Unknown
COG id: COG3548
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21121; Mature: 21121
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKERFEAFTDAVIAIIMTILVLDIHLPTDDHSMRAIIAIAPSFLAYIVSFTILAVMWVN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC HHNLFLHVKTVNHKILYTNIFLLFWATLLPATTAWFGSDIYSSTAAWLYAVNVIVYNISF CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMVRNEVLKINDRLKHLYITEIASLILNIIALFIVFFWPPFIMISLLMDILLWSIQPVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKG CCC >Mature Secondary Structure MNKERFEAFTDAVIAIIMTILVLDIHLPTDDHSMRAIIAIAPSFLAYIVSFTILAVMWVN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC HHNLFLHVKTVNHKILYTNIFLLFWATLLPATTAWFGSDIYSSTAAWLYAVNVIVYNISF CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMVRNEVLKINDRLKHLYITEIASLILNIIALFIVFFWPPFIMISLLMDILLWSIQPVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA