Click here to switch to the map view.

The map label for this gene is rsgA

Identifier: 116492600

GI number: 116492600

Start: 839408

End: 840337

Strand: Direct

Name: rsgA

Synonym: PEPE_0833

Alternate gene names: 116492600

Gene position: 839408-840337 (Clockwise)

Preceding gene: 116492599

Following gene: 116492601

Centisome position: 45.81

GC content: 37.2

Gene sequence:

>930_bases
ATGCATACTGGACAAATTATACAATTATTAGCAGGATTTTATGATGTGTTAACAGAAGACCATAAAATCGTTAGGACTCG
GGCACGAGGTAATTTTCGCAATCAAAAAACTAGCCCGTTAGTGGGTGATATGGTCGATTTTAAGGAAAGTGAAAATGATA
CTGGATACATTACCAAAATTCATACGCGTGAAAATGAGTTGGTGCGTCCGCCATTAGCTAATATCGATCAAGCTGTAATT
GTCACTGCAGCAACTGAGCCCAGCTTTTCGGCAAATTTGCTTGATCGTCAATTAGTGGCATTGGCTGAAAAACATATTGA
GGCTATTTTGTATTTTTCAAAAACGGATCTTTTAAGCCCAACGGAGTTTCAAGATTTACAAAAAATTGCCGGCTACTACC
AAAAAATTGGCTATCAAGTGATTTTTCCAATTAGTAGTCAACCTGATGCTGATTTAATCGAATTGAAAGAGTCATTTAAA
AATCAACTAACTATTTTTATGGGACAGACTGGTGCGGGAAAATCAACGCTCTTAAATCGAATTGATTCAAAGTTGAATAT
TGCCACTGGAGAAGTTTCACAGGCATTAAATCGTGGTAAACACACGACGCGTAAGGTTTCTTTGATTCCCATTGAAGATG
GTTTAGTGGCTGATACACCAGGTTTTTCAACTTATGCAGTTTTTGAAATGGCTGATACACAATTAAAAGAATATTTTATT
GATTTTAAGAAGCTCAGCCAAAATTGTCGTTTTCGAGAATGCTTACATCTAAACGAACCGGGATGTGCAGTCAAAGCGGC
AGTTGAAGACGGTAGTGTGCTAAGCAGCCGTTATGCTAATTATGAACAGTTTATCGAACTGATTCGGAATCAAAAACCTG
AATATAAGCGTAAAGGTTATCAAAAAAAGGACCGGAGGAAGAAGAAATGA

Upstream 100 bases:

>100_bases
GATAATAATCGCATCATCTCCCAAGATGTTGTATCTGGTCAAGTGGTTGTGCCACGAGTGACAACAATTACGTTTACGGT
TGCTAATTAACGGAGGACGC

Downstream 100 bases:

>100_bases
TTAAAGTAGCCCCATCAATTTTAAGTGCAGACCCAGCTAACTTAATGGGTGATATTAATAAAGTAGAAGGAGCGGACTAT
CTTCACGTTGATGTGATGGA

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MHTGQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFKESENDTGYITKIHTRENELVRPPLANIDQAVI
VTAATEPSFSANLLDRQLVALAEKHIEAILYFSKTDLLSPTEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFK
NQLTIFMGQTGAGKSTLLNRIDSKLNIATGEVSQALNRGKHTTRKVSLIPIEDGLVADTPGFSTYAVFEMADTQLKEYFI
DFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQFIELIRNQKPEYKRKGYQKKDRRKKK

Sequences:

>Translated_309_residues
MHTGQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFKESENDTGYITKIHTRENELVRPPLANIDQAVI
VTAATEPSFSANLLDRQLVALAEKHIEAILYFSKTDLLSPTEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFK
NQLTIFMGQTGAGKSTLLNRIDSKLNIATGEVSQALNRGKHTTRKVSLIPIEDGLVADTPGFSTYAVFEMADTQLKEYFI
DFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQFIELIRNQKPEYKRKGYQKKDRRKKK
>Mature_309_residues
MHTGQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFKESENDTGYITKIHTRENELVRPPLANIDQAVI
VTAATEPSFSANLLDRQLVALAEKHIEAILYFSKTDLLSPTEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFK
NQLTIFMGQTGAGKSTLLNRIDSKLNIATGEVSQALNRGKHTTRKVSLIPIEDGLVADTPGFSTYAVFEMADTQLKEYFI
DFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQFIELIRNQKPEYKRKGYQKKDRRKKK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=317, Percent_Identity=32.1766561514196, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_PEDPA (Q03FX9)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804335.1
- ProteinModelPortal:   Q03FX9
- SMR:   Q03FX9
- STRING:   Q03FX9
- GeneID:   4417985
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_0833
- NMPDR:   fig|278197.10.peg.737
- eggNOG:   COG1162
- HOGENOM:   HBG652450
- OMA:   FRDCKHL
- PhylomeDB:   Q03FX9
- BioCyc:   PPEN278197:PEPE_0833-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881
- Gene3D:   G3DSA:2.40.50.140
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 35064; Mature: 35064

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTGQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFKESENDTGYITKI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEE
HTRENELVRPPLANIDQAVIVTAATEPSFSANLLDRQLVALAEKHIEAILYFSKTDLLSP
ECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
TEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFKNQLTIFMGQTGAGKSTLLNR
CHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHH
IDSKLNIATGEVSQALNRGKHTTRKVSLIPIEDGLVADTPGFSTYAVFEMADTQLKEYFI
HHHHHEECHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCEEEEHHHHHHHHHHHHH
DFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQFIELIRNQKPEYKRKGY
HHHHHHCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCCHHHCCC
QKKDRRKKK
CHHHHHCCC
>Mature Secondary Structure
MHTGQIIQLLAGFYDVLTEDHKIVRTRARGNFRNQKTSPLVGDMVDFKESENDTGYITKI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEE
HTRENELVRPPLANIDQAVIVTAATEPSFSANLLDRQLVALAEKHIEAILYFSKTDLLSP
ECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
TEFQDLQKIAGYYQKIGYQVIFPISSQPDADLIELKESFKNQLTIFMGQTGAGKSTLLNR
CHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHH
IDSKLNIATGEVSQALNRGKHTTRKVSLIPIEDGLVADTPGFSTYAVFEMADTQLKEYFI
HHHHHEECHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCEEEEHHHHHHHHHHHHH
DFKKLSQNCRFRECLHLNEPGCAVKAAVEDGSVLSSRYANYEQFIELIRNQKPEYKRKGY
HHHHHHCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCCHHHCCC
QKKDRRKKK
CHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA