| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492543
Identifier: 116492543
GI number: 116492543
Start: 793710
End: 794129
Strand: Direct
Name: 116492543
Synonym: PEPE_0775
Alternate gene names: NA
Gene position: 793710-794129 (Clockwise)
Preceding gene: 116492542
Following gene: 116492544
Centisome position: 43.32
GC content: 30.48
Gene sequence:
>420_bases ATGAAAGATAAAGCAATTGAAGCATTAATCAATACTCTAAATGACGGAGCTAAGAACATTCCAAAAATTACGGAAACGAT GATTCGCCAATACCAACAAGCACAATTGTTTTATGGAATTGCTAGTTTTGCCATAGCTATCTTCTTAGTTATTTTAATTA GATGGGTGTGGATGAAAGTGTTTGAAAAGTATAAGCAATATAAACAGGTTAAAGAAAAAAAGCCGAATCCGTTTTCAACA AGAACAAATTTTTCAAGTTTTGTCCATGCTAATGATTTAGAAATTCAAATTTTAATCCTAAGTATAGGTACATTGATAGT AGGTGTAATAGCAATATCATTATTAGTCGGTGGATGTGATAACATCGGGAACTATATTAGTCCAATTAACGGATTGATTA ACGATCTAACTAATAAATAA
Upstream 100 bases:
>100_bases ATGATTCAGTTGAATTTAATAAAGACTGGTTGTGGAATATCTCTAGATGCTACAACACTTTGTATGATATCCAACACCCT TATGCGGAGGAGGACTAAAC
Downstream 100 bases:
>100_bases GAAGGTATCGATAGAATGACAGTATATGTACTTTGGTGGCAAAAATACGATGTTAGTTAAGGGGTGGAAGCATGATATTT CAAATAATAGTGGTAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKDKAIEALINTLNDGAKNIPKITETMIRQYQQAQLFYGIASFAIAIFLVILIRWVWMKVFEKYKQYKQVKEKKPNPFST RTNFSSFVHANDLEIQILILSIGTLIVGVIAISLLVGGCDNIGNYISPINGLINDLTNK
Sequences:
>Translated_139_residues MKDKAIEALINTLNDGAKNIPKITETMIRQYQQAQLFYGIASFAIAIFLVILIRWVWMKVFEKYKQYKQVKEKKPNPFST RTNFSSFVHANDLEIQILILSIGTLIVGVIAISLLVGGCDNIGNYISPINGLINDLTNK >Mature_139_residues MKDKAIEALINTLNDGAKNIPKITETMIRQYQQAQLFYGIASFAIAIFLVILIRWVWMKVFEKYKQYKQVKEKKPNPFST RTNFSSFVHANDLEIQILILSIGTLIVGVIAISLLVGGCDNIGNYISPINGLINDLTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15693; Mature: 15693
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKAIEALINTLNDGAKNIPKITETMIRQYQQAQLFYGIASFAIAIFLVILIRWVWMKV CCHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEKYKQYKQVKEKKPNPFSTRTNFSSFVHANDLEIQILILSIGTLIVGVIAISLLVGGCD HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH NIGNYISPINGLINDLTNK HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDKAIEALINTLNDGAKNIPKITETMIRQYQQAQLFYGIASFAIAIFLVILIRWVWMKV CCHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEKYKQYKQVKEKKPNPFSTRTNFSSFVHANDLEIQILILSIGTLIVGVIAISLLVGGCD HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH NIGNYISPINGLINDLTNK HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA