| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116492542
Identifier: 116492542
GI number: 116492542
Start: 793366
End: 793707
Strand: Direct
Name: 116492542
Synonym: PEPE_0774
Alternate gene names: NA
Gene position: 793366-793707 (Clockwise)
Preceding gene: 116492541
Following gene: 116492543
Centisome position: 43.3
GC content: 35.38
Gene sequence:
>342_bases ATGAAAAAAATTAAATTTATTAATTTAGAAACAAAAGAAGAGGAAACAGAATTTGGAACGTGCGAACTATGTTTTAGTAC AGGAACAGTTGATAACCCCGTTCTAACCTTCAAGGTTGTTAAAGAAGATGGATCAGAAGAGAATCTTTCAATCAATGGCT ATGAGTGGGATTGGGGTGATTACAATGAAATTGACATTACAAACCTCGTTGACTTCGCAGCTTTCTTAGCTCCGTTAGAA TTTGATGATTCAGTTGAATTTAATAAAGACTGGTTGTGGAATATCTCTAGATGCTACAACACTTTGTATGATATCCAACA CCCTTATGCGGAGGAGGACTAA
Upstream 100 bases:
>100_bases TGAAGATTAATCCGGGTGATTGGATTGCTACAGGTGTCAATGGTGAACATTGGGCCATTGCTGATGAAATCTTCAAGAAG ACTTATGAAGAGGTGGAATA
Downstream 100 bases:
>100_bases ACATGAAAGATAAAGCAATTGAAGCATTAATCAATACTCTAAATGACGGAGCTAAGAACATTCCAAAAATTACGGAAACG ATGATTCGCCAATACCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKKIKFINLETKEEETEFGTCELCFSTGTVDNPVLTFKVVKEDGSEENLSINGYEWDWGDYNEIDITNLVDFAAFLAPLE FDDSVEFNKDWLWNISRCYNTLYDIQHPYAEED
Sequences:
>Translated_113_residues MKKIKFINLETKEEETEFGTCELCFSTGTVDNPVLTFKVVKEDGSEENLSINGYEWDWGDYNEIDITNLVDFAAFLAPLE FDDSVEFNKDWLWNISRCYNTLYDIQHPYAEED >Mature_113_residues MKKIKFINLETKEEETEFGTCELCFSTGTVDNPVLTFKVVKEDGSEENLSINGYEWDWGDYNEIDITNLVDFAAFLAPLE FDDSVEFNKDWLWNISRCYNTLYDIQHPYAEED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13256; Mature: 13256
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKFINLETKEEETEFGTCELCFSTGTVDNPVLTFKVVKEDGSEENLSINGYEWDWGD CCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEECCEECCCCC YNEIDITNLVDFAAFLAPLEFDDSVEFNKDWLWNISRCYNTLYDIQHPYAEED CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKIKFINLETKEEETEFGTCELCFSTGTVDNPVLTFKVVKEDGSEENLSINGYEWDWGD CCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEECCEECCCCC YNEIDITNLVDFAAFLAPLEFDDSVEFNKDWLWNISRCYNTLYDIQHPYAEED CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA