Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492509

Identifier: 116492509

GI number: 116492509

Start: 778119

End: 779036

Strand: Direct

Name: 116492509

Synonym: PEPE_0741

Alternate gene names: NA

Gene position: 778119-779036 (Clockwise)

Preceding gene: 116492508

Following gene: 116492510

Centisome position: 42.46

GC content: 30.94

Gene sequence:

>918_bases
ATGGATAACACAATCAATGAAGATAAAAAAAGAGCAACATTATCCGACAAGTTGCTGAAAGTACAATCTGATTTGGATGC
TGGATTAAGCAAAGGTCGTAGTTTCGCAGAATTATTTCGTACTTTAACAACTACAGATGATAATGTCGAGTTATTGGATG
CTGCAAAAAAACTTTATGCGTTCGTAGTTGATAGCGATGCAGTTATTTTTCCTCAGAAATTTGAAGCTAGTGACTATTAT
TTAATTTTTATGACTCGCTTAATTGAATTAAGCGGTTTAAAAACTAAACTGGGTCTGGAAGTTGAACAAGAAAATAATTA
CCAAAAACTTTTCCATACTTGGACGGGGACTAGCCAAAAGTTCCGTTTTAAAATGGCAAATAATCAGGCTGAATATGTTG
ATCAGGCAACGCAACAAACTATTTTTCATTTGAGTTTAGATGAACGGAAAATGAGCTTTAATACTGATACAATTAATAAT
TTTTATTTTCTAAATCAGCAAGATGACGAAGATAGCTTGGTTGACGAGATTAAGTTATTTACTAAATTTGGCCAAATTTT
AGAAGAAGTATACAATTTTGAAGTTGACTTTAATATGTTTGATGCTCGTAATAATAAAGTTTATGAGTTTGATCAAACTA
GCTTAAATACAGATATTATTGATGAACTTTTTGTGGATGCTGCTAAAAATGGTTTTACTTTGCTAAATGCTGAGAAACTA
TTGGGAGCATACCTAAAATTAGATAATCATGTAGTTTTCTCGATTTTTCAAGAGATACCAGCAACCGACCAATGGGCTAT
TCAAGTTAATGATAAAAGTGAAGAAAAATCATTGTTTGATATCTTGAAGCAGTACGATTTCTTGAACGATTGGTATGTTA
GAAATATTGCAGATTTAAAATTAAAAATGTTATTTTAG

Upstream 100 bases:

>100_bases
AAGAAGAGTTTCACGAGTTATAGTGAGTTCCGTGAAACTGCCGACCAACTGTATAAAAATTATCTCAGTAGCCTATTAGA
CGAAGGGCAGGTAAAGTCTA

Downstream 100 bases:

>100_bases
GTGATTAAGATGGATTGGGCAAAAATGTTGCAAACATCGGTTGCGTTAGACCGTGATATTAGATTTAAACATAACTTGGC
CAATAGTATGCAAGACCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDNTINEDKKRATLSDKLLKVQSDLDAGLSKGRSFAELFRTLTTTDDNVELLDAAKKLYAFVVDSDAVIFPQKFEASDYY
LIFMTRLIELSGLKTKLGLEVEQENNYQKLFHTWTGTSQKFRFKMANNQAEYVDQATQQTIFHLSLDERKMSFNTDTINN
FYFLNQQDDEDSLVDEIKLFTKFGQILEEVYNFEVDFNMFDARNNKVYEFDQTSLNTDIIDELFVDAAKNGFTLLNAEKL
LGAYLKLDNHVVFSIFQEIPATDQWAIQVNDKSEEKSLFDILKQYDFLNDWYVRNIADLKLKMLF

Sequences:

>Translated_305_residues
MDNTINEDKKRATLSDKLLKVQSDLDAGLSKGRSFAELFRTLTTTDDNVELLDAAKKLYAFVVDSDAVIFPQKFEASDYY
LIFMTRLIELSGLKTKLGLEVEQENNYQKLFHTWTGTSQKFRFKMANNQAEYVDQATQQTIFHLSLDERKMSFNTDTINN
FYFLNQQDDEDSLVDEIKLFTKFGQILEEVYNFEVDFNMFDARNNKVYEFDQTSLNTDIIDELFVDAAKNGFTLLNAEKL
LGAYLKLDNHVVFSIFQEIPATDQWAIQVNDKSEEKSLFDILKQYDFLNDWYVRNIADLKLKMLF
>Mature_305_residues
MDNTINEDKKRATLSDKLLKVQSDLDAGLSKGRSFAELFRTLTTTDDNVELLDAAKKLYAFVVDSDAVIFPQKFEASDYY
LIFMTRLIELSGLKTKLGLEVEQENNYQKLFHTWTGTSQKFRFKMANNQAEYVDQATQQTIFHLSLDERKMSFNTDTINN
FYFLNQQDDEDSLVDEIKLFTKFGQILEEVYNFEVDFNMFDARNNKVYEFDQTSLNTDIIDELFVDAAKNGFTLLNAEKL
LGAYLKLDNHVVFSIFQEIPATDQWAIQVNDKSEEKSLFDILKQYDFLNDWYVRNIADLKLKMLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35618; Mature: 35618

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTINEDKKRATLSDKLLKVQSDLDAGLSKGRSFAELFRTLTTTDDNVELLDAAKKLYA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHEE
FVVDSDAVIFPQKFEASDYYLIFMTRLIELSGLKTKLGLEVEQENNYQKLFHTWTGTSQK
EEECCCCEEECCCCCCCCEEHHHHHHHHHHCCCCHHHCEEEECCCCHHHHHHHHCCCCCE
FRFKMANNQAEYVDQATQQTIFHLSLDERKMSFNTDTINNFYFLNQQDDEDSLVDEIKLF
EEEEECCCHHHHHHHHHHHEEEEEEECCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHH
TKFGQILEEVYNFEVDFNMFDARNNKVYEFDQTSLNTDIIDELFVDAAKNGFTLLNAEKL
HHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
LGAYLKLDNHVVFSIFQEIPATDQWAIQVNDKSEEKSLFDILKQYDFLNDWYVRNIADLK
HHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCE
LKMLF
EEECC
>Mature Secondary Structure
MDNTINEDKKRATLSDKLLKVQSDLDAGLSKGRSFAELFRTLTTTDDNVELLDAAKKLYA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHEE
FVVDSDAVIFPQKFEASDYYLIFMTRLIELSGLKTKLGLEVEQENNYQKLFHTWTGTSQK
EEECCCCEEECCCCCCCCEEHHHHHHHHHHCCCCHHHCEEEECCCCHHHHHHHHCCCCCE
FRFKMANNQAEYVDQATQQTIFHLSLDERKMSFNTDTINNFYFLNQQDDEDSLVDEIKLF
EEEEECCCHHHHHHHHHHHEEEEEEECCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHH
TKFGQILEEVYNFEVDFNMFDARNNKVYEFDQTSLNTDIIDELFVDAAKNGFTLLNAEKL
HHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
LGAYLKLDNHVVFSIFQEIPATDQWAIQVNDKSEEKSLFDILKQYDFLNDWYVRNIADLK
HHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCE
LKMLF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA