| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492510
Identifier: 116492510
GI number: 116492510
Start: 779046
End: 779585
Strand: Direct
Name: 116492510
Synonym: PEPE_0742
Alternate gene names: NA
Gene position: 779046-779585 (Clockwise)
Preceding gene: 116492509
Following gene: 116492511
Centisome position: 42.52
GC content: 35.56
Gene sequence:
>540_bases ATGGATTGGGCAAAAATGTTGCAAACATCGGTTGCGTTAGACCGTGATATTAGATTTAAACATAACTTGGCCAATAGTAT GCAAGACCGGATTCAAGAAGCTTATATATCTTTGGATGTTGAACTTGCAGAAATAGCTAATGCTGCAGAATGGTTCAAGG TATGGAAAACTCATCGTGGCAAACGCGACGGAGAGTTATCGGTCCATCAGACGGTTTTGAATGAGTTTGTGGATGCTACT GATTTTTTTCTATTGATGGCTAATTTAAACCAATGGAATCATTTGATAGTAATTGAAGATGAAGAAATTGATAAGTATAA GGCGGATTCTCGTACGCCCGACTTATCTCTAATGTATTTAAATATTAAGAAAATGTTGTTTTCGGCGTATGCGTATAATC GAAGCACAGATTATGTACATGCTTGGCATCTGTTTATGAAGTTTGGTATTAAAGGCTTAGGATTTACTCCTGAAGAAATT GAGGAAAGCTTTTTTGCTAAAAATAAGGTTAATTACGAGCGTCAAGAAAATAATTACTAA
Upstream 100 bases:
>100_bases ATCATTGTTTGATATCTTGAAGCAGTACGATTTCTTGAACGATTGGTATGTTAGAAATATTGCAGATTTAAAATTAAAAA TGTTATTTTAGGTGATTAAG
Downstream 100 bases:
>100_bases TAGGAAATAACAGAAAACCCAAAACCTGCTCTGGTTTTGGGTTTTCTATTAATTAATAAAACCGTAAAATACGGTCAATA ATTGAAGATTTGTAGTTAAT
Product: dUTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MDWAKMLQTSVALDRDIRFKHNLANSMQDRIQEAYISLDVELAEIANAAEWFKVWKTHRGKRDGELSVHQTVLNEFVDAT DFFLLMANLNQWNHLIVIEDEEIDKYKADSRTPDLSLMYLNIKKMLFSAYAYNRSTDYVHAWHLFMKFGIKGLGFTPEEI EESFFAKNKVNYERQENNY
Sequences:
>Translated_179_residues MDWAKMLQTSVALDRDIRFKHNLANSMQDRIQEAYISLDVELAEIANAAEWFKVWKTHRGKRDGELSVHQTVLNEFVDAT DFFLLMANLNQWNHLIVIEDEEIDKYKADSRTPDLSLMYLNIKKMLFSAYAYNRSTDYVHAWHLFMKFGIKGLGFTPEEI EESFFAKNKVNYERQENNY >Mature_179_residues MDWAKMLQTSVALDRDIRFKHNLANSMQDRIQEAYISLDVELAEIANAAEWFKVWKTHRGKRDGELSVHQTVLNEFVDAT DFFLLMANLNQWNHLIVIEDEEIDKYKADSRTPDLSLMYLNIKKMLFSAYAYNRSTDYVHAWHLFMKFGIKGLGFTPEEI EESFFAKNKVNYERQENNY
Specific function: Unknown
COG id: COG4508
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21200; Mature: 21200
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWAKMLQTSVALDRDIRFKHNLANSMQDRIQEAYISLDVELAEIANAAEWFKVWKTHRG CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC KRDGELSVHQTVLNEFVDATDFFLLMANLNQWNHLIVIEDEEIDKYKADSRTPDLSLMYL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEHH NIKKMLFSAYAYNRSTDYVHAWHLFMKFGIKGLGFTPEEIEESFFAKNKVNYERQENNY HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDWAKMLQTSVALDRDIRFKHNLANSMQDRIQEAYISLDVELAEIANAAEWFKVWKTHRG CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC KRDGELSVHQTVLNEFVDATDFFLLMANLNQWNHLIVIEDEEIDKYKADSRTPDLSLMYL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEHH NIKKMLFSAYAYNRSTDYVHAWHLFMKFGIKGLGFTPEEIEESFFAKNKVNYERQENNY HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA