Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is yqeK [H]

Identifier: 116492475

GI number: 116492475

Start: 746542

End: 747150

Strand: Direct

Name: yqeK [H]

Synonym: PEPE_0707

Alternate gene names: 116492475

Gene position: 746542-747150 (Clockwise)

Preceding gene: 116492474

Following gene: 116492476

Centisome position: 40.74

GC content: 35.63

Gene sequence:

>609_bases
ATGAGCAATAATGAAGAATTAATTTATCAAAAAAACTACGTGCCTTTTACGCGAGCAGAATTAATCGACGCTGTTTCTAA
AAGTATTACCGGAAGTCGATTCGAACATGTTCTACGAGTTGAAAAGAAGGCGATTGAATTAGCACAAAAATATGATGCTG
ACGTGGAGAAAGCCAGTATTACCGGTTTACTACACGATTATGCCAAGCAACGTAGTGATAGTGAATTTATTAAATATATT
AATGAACTAGAGCTTGATCCCCAATTATTAGATTATGGTAATGCTATTTGGCATGGTGTTGTTGGCGCAGAAATCGTTAA
AAATGAATTGAAGATTTATGATGAAGAAATTTTAAATGCAATTCGACGTCATACCGTCGGGGCACCATACATGACATTGA
TTGATCAAATAGTGTTCATGGCCGATTATATTGAAGATGGTCGTGATTTTGAAGGCGTAGAACAAGCCCGTTTAATTACA
GAACAAAGTTTACAAAAGGGCGTTACTTTCCAAATGAAGAGTACCCTTGCATACTTAATCGCTGGAAATAAGCCAGTTTT
TCCAGCTACGATTGAAAGTTATAACGCATGGATCTCAAAATTTAATTAA

Upstream 100 bases:

>100_bases
ATTAGTTCCACCAAAATTAGAAAAAACGTTAAGAATGGGTGTTCAATTAGGTATCAAGTGCCCGAAAGTGTCGAAAAGTA
TATAAAGGAGCACCGTTTAT

Downstream 100 bases:

>100_bases
AACTAGGAGAAATAGATTGAACAATTTAGAAGAATTAGAATTACTAGTAAAAGCAGCAGATAGCAAACGAGCTGAAAATA
CAATCGTTTTAAATGTACGT

Product: HD superfamily NAD metabolism hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSNNEELIYQKNYVPFTRAELIDAVSKSITGSRFEHVLRVEKKAIELAQKYDADVEKASITGLLHDYAKQRSDSEFIKYI
NELELDPQLLDYGNAIWHGVVGAEIVKNELKIYDEEILNAIRRHTVGAPYMTLIDQIVFMADYIEDGRDFEGVEQARLIT
EQSLQKGVTFQMKSTLAYLIAGNKPVFPATIESYNAWISKFN

Sequences:

>Translated_202_residues
MSNNEELIYQKNYVPFTRAELIDAVSKSITGSRFEHVLRVEKKAIELAQKYDADVEKASITGLLHDYAKQRSDSEFIKYI
NELELDPQLLDYGNAIWHGVVGAEIVKNELKIYDEEILNAIRRHTVGAPYMTLIDQIVFMADYIEDGRDFEGVEQARLIT
EQSLQKGVTFQMKSTLAYLIAGNKPVFPATIESYNAWISKFN
>Mature_201_residues
SNNEELIYQKNYVPFTRAELIDAVSKSITGSRFEHVLRVEKKAIELAQKYDADVEKASITGLLHDYAKQRSDSEFIKYIN
ELELDPQLLDYGNAIWHGVVGAEIVKNELKIYDEEILNAIRRHTVGAPYMTLIDQIVFMADYIEDGRDFEGVEQARLITE
QSLQKGVTFQMKSTLAYLIAGNKPVFPATIESYNAWISKFN

Specific function: Unknown

COG id: COG1713

COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005249
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23103; Mature: 22972

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNEELIYQKNYVPFTRAELIDAVSKSITGSRFEHVLRVEKKAIELAQKYDADVEKASI
CCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TGLLHDYAKQRSDSEFIKYINELELDPQLLDYGNAIWHGVVGAEIVKNELKIYDEEILNA
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRHTVGAPYMTLIDQIVFMADYIEDGRDFEGVEQARLITEQSLQKGVTFQMKSTLAYLI
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGNKPVFPATIESYNAWISKFN
CCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNNEELIYQKNYVPFTRAELIDAVSKSITGSRFEHVLRVEKKAIELAQKYDADVEKASI
CCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TGLLHDYAKQRSDSEFIKYINELELDPQLLDYGNAIWHGVVGAEIVKNELKIYDEEILNA
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRHTVGAPYMTLIDQIVFMADYIEDGRDFEGVEQARLITEQSLQKGVTFQMKSTLAYLI
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGNKPVFPATIESYNAWISKFN
CCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]