Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is yqeL [H]

Identifier: 116492476

GI number: 116492476

Start: 747167

End: 747523

Strand: Direct

Name: yqeL [H]

Synonym: PEPE_0708

Alternate gene names: 116492476

Gene position: 747167-747523 (Clockwise)

Preceding gene: 116492475

Following gene: 116492477

Centisome position: 40.78

GC content: 36.13

Gene sequence:

>357_bases
TTGAACAATTTAGAAGAATTAGAATTACTAGTAAAAGCAGCAGATAGCAAACGAGCTGAAAATACAATCGTTTTAAATGT
ACGTGAGGTTAGCACCTTAGCAGACTACTTTATGATTACAAGTGCTGATTCTAACCGCCAAGTAGCTGCCATTGCAGATG
CTATTATTGAAAAGGCTAAGGAAAACCAGATCGAAATCCGTCGTATTGAAGGAAATCGTGCTGCAGAATGGATTTTGATT
GACTTAGGAAATATTGTTATTAATGTTTTCCAAACGGATCAAAGAAAGTACTATAATCTGGAAAAGCTTTGGTCCCAAGC
TGAAGCAGTTGAAACAACTGATTGGATTGCAGAATAA

Upstream 100 bases:

>100_bases
CTTGCATACTTAATCGCTGGAAATAAGCCAGTTTTTCCAGCTACGATTGAAAGTTATAACGCATGGATCTCAAAATTTAA
TTAAAACTAGGAGAAATAGA

Downstream 100 bases:

>100_bases
TGATATATCAAAGCTTTGCGGAGTTATATGACCAACTTTTTGATGAAGATGAATACCAAAATTGGTTTGAATATACGCAA
AAAGAAGTTGATTTAAGTCA

Product: Iojap family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAKENQIEIRRIEGNRAAEWILI
DLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE

Sequences:

>Translated_118_residues
MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAKENQIEIRRIEGNRAAEWILI
DLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE
>Mature_118_residues
MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAKENQIEIRRIEGNRAAEWILI
DLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=98, Percent_Identity=31.6326530612245, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 13498; Mature: 13498

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAK
CCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHC
ENQIEIRRIEGNRAAEWILIDLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE
CCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHCCHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAK
CCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHC
ENQIEIRRIEGNRAAEWILIDLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE
CCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHCCHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]