| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492373
Identifier: 116492373
GI number: 116492373
Start: 634316
End: 634621
Strand: Direct
Name: 116492373
Synonym: PEPE_0578
Alternate gene names: NA
Gene position: 634316-634621 (Clockwise)
Preceding gene: 116492372
Following gene: 116492374
Centisome position: 34.62
GC content: 36.27
Gene sequence:
>306_bases ATGAGTTTAAATGTGCTATTAGTTTGTGGATCCGGTGCTTCATCAGGGTTTATGGCTGCTAATATGCGAAAAGCAGCTAA AAAGGTTGGTTTAGATTACAAAATTCAGGCTAGAAGTGAAGCGGAGCTTAATGATTATGCTAATGATATTGATGTATTAA TGGTGGGCCCTCATCTAAAATCAGAATTTAATGCACTAAAGAATGCTGTACCAGAAAATGTTACTCCAATTTTAATGGAA CCAGATTACTATGCAATTTTAGATGGGGCAGCTGCTATTAAACATATCCAGTCAGAAGTCCAATAG
Upstream 100 bases:
>100_bases AATCAACTTCACCCTACGAGGAAGAAAATTAATTTATTTATATATGTAAGGGCTTTATTCTTAAGATGTAATAAAGAAGA AAAAATAGGGGGAATATATT
Downstream 100 bases:
>100_bases TTATGGAGGCAAGCTATGAATAAATTTATGGACGCTCTTAATAATGGTTTTGCACCTAAAGCCCAGAAAGTAGCTAATAA TGAATGGATTTTAACTATTA
Product: cellobiose-specific PTS system IIB component
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System Cellobiose-Specific IIB Component; PTS System; PTS System Transporter Subunit IIB; PTS System Protein
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSLNVLLVCGSGASSGFMAANMRKAAKKVGLDYKIQARSEAELNDYANDIDVLMVGPHLKSEFNALKNAVPENVTPILME PDYYAILDGAAAIKHIQSEVQ
Sequences:
>Translated_101_residues MSLNVLLVCGSGASSGFMAANMRKAAKKVGLDYKIQARSEAELNDYANDIDVLMVGPHLKSEFNALKNAVPENVTPILME PDYYAILDGAAAIKHIQSEVQ >Mature_100_residues SLNVLLVCGSGASSGFMAANMRKAAKKVGLDYKIQARSEAELNDYANDIDVLMVGPHLKSEFNALKNAVPENVTPILMEP DYYAILDGAAAIKHIQSEVQ
Specific function: Unknown
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 10897; Mature: 10765
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNVLLVCGSGASSGFMAANMRKAAKKVGLDYKIQARSEAELNDYANDIDVLMVGPHLK CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCHH SEFNALKNAVPENVTPILMEPDYYAILDGAAAIKHIQSEVQ HHHHHHHHCCCCCCCEEEECCCEEEEECHHHHHHHHHHHCC >Mature Secondary Structure SLNVLLVCGSGASSGFMAANMRKAAKKVGLDYKIQARSEAELNDYANDIDVLMVGPHLK CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCHH SEFNALKNAVPENVTPILMEPDYYAILDGAAAIKHIQSEVQ HHHHHHHHCCCCCCCEEEECCCEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA