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The map label for this gene is ywqC [H]

Identifier: 116492360

GI number: 116492360

Start: 620780

End: 621565

Strand: Direct

Name: ywqC [H]

Synonym: PEPE_0565

Alternate gene names: 116492360

Gene position: 620780-621565 (Clockwise)

Preceding gene: 116492359

Following gene: 116492361

Centisome position: 33.88

GC content: 37.53

Gene sequence:

>786_bases
ATGGAATCAGTAGAATCACAACAAATTAGTATCGGTCAGATTTTGTCGATACTACGTAAACACATTGGATTAATTTTTGC
TAGTACGTTTATCGTAACTTTGTTAGCCGCTTTTATGACTTTTTTTGTTATGACACCAAAGTACAGTGCTACGACTCAAA
TTTTGGTTAACCGTAAATTGTCAGATGATATGGCGGGCGCCCAATTACAACAAACTCAAGCCGATGTTCAAATGATTAGT
ACATATAAAGATATCATTACCAGTCCCACGGTTTTGAAGACAGTTAACACTAAATTACAAGGTCAGCCTGGCTATGAAAA
GGGTGATGTTGATAGTTTAAAGGGTTCACTTTCAGTTAATAGTCAACAAAACTCTCAAGTTTTCTCCATCACCGCTAAAA
GTACCAATCCTAATACAGCAGCTAAGATGGCGAACGAAACAGCTACAACTTTTAAGAATAAAGTAGTTAAGATTATGAGT
ATCAATAATGTTTCGATCGTTTCGAAAGCGACTGCGGATGACCAACCAGTTAGTCCAAGGACCAAGTTAAACATTGCGGC
TGGTTTGGCAGTTGGTTTACTTTTAGGAATGGGATTAGCATTCTTACGCGAATTTAGTGATCGAACCGTTACCTCTGAAG
AATTCCTAACCGATGAATTAGGCCTTAAAGGTTTGGGAATTATTAGTGAAATCAACGAAAGTGATATTCGTCGTAAAATC
ACACCAAAACTTAGAGCACCAATGAGTGATGATGATGATCAATCTAGAATGCGGAGAAGGGTATAG

Upstream 100 bases:

>100_bases
CGGAACATTCCTATTTAGTAACTACATCAATGGGGAAAATAACCTGTCATCAATTTCGAAAAATATGTTTGATTACCTAA
AATAAACCTTGGAGGAACTC

Downstream 100 bases:

>100_bases
GTAATCGAAATGTTTAAGAAGAAACAAAAGCTAGATAACGAAAGTCTTAAAAATGGTGTGGGATTAGTTACCTTTACTGA
TCCGACTTCCACGATTGCAG

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MESVESQQISIGQILSILRKHIGLIFASTFIVTLLAAFMTFFVMTPKYSATTQILVNRKLSDDMAGAQLQQTQADVQMIS
TYKDIITSPTVLKTVNTKLQGQPGYEKGDVDSLKGSLSVNSQQNSQVFSITAKSTNPNTAAKMANETATTFKNKVVKIMS
INNVSIVSKATADDQPVSPRTKLNIAAGLAVGLLLGMGLAFLREFSDRTVTSEEFLTDELGLKGLGIISEINESDIRRKI
TPKLRAPMSDDDDQSRMRRRV

Sequences:

>Translated_261_residues
MESVESQQISIGQILSILRKHIGLIFASTFIVTLLAAFMTFFVMTPKYSATTQILVNRKLSDDMAGAQLQQTQADVQMIS
TYKDIITSPTVLKTVNTKLQGQPGYEKGDVDSLKGSLSVNSQQNSQVFSITAKSTNPNTAAKMANETATTFKNKVVKIMS
INNVSIVSKATADDQPVSPRTKLNIAAGLAVGLLLGMGLAFLREFSDRTVTSEEFLTDELGLKGLGIISEINESDIRRKI
TPKLRAPMSDDDDQSRMRRRV
>Mature_261_residues
MESVESQQISIGQILSILRKHIGLIFASTFIVTLLAAFMTFFVMTPKYSATTQILVNRKLSDDMAGAQLQQTQADVQMIS
TYKDIITSPTVLKTVNTKLQGQPGYEKGDVDSLKGSLSVNSQQNSQVFSITAKSTNPNTAAKMANETATTFKNKVVKIMS
INNVSIVSKATADDQPVSPRTKLNIAAGLAVGLLLGMGLAFLREFSDRTVTSEEFLTDELGLKGLGIISEINESDIRRKI
TPKLRAPMSDDDDQSRMRRRV

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 28540; Mature: 28540

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVESQQISIGQILSILRKHIGLIFASTFIVTLLAAFMTFFVMTPKYSATTQILVNRKL
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHECCCC
SDDMAGAQLQQTQADVQMISTYKDIITSPTVLKTVNTKLQGQPGYEKGDVDSLKGSLSVN
CCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEC
SQQNSQVFSITAKSTNPNTAAKMANETATTFKNKVVKIMSINNVSIVSKATADDQPVSPR
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCCCCCCCCCC
TKLNIAAGLAVGLLLGMGLAFLREFSDRTVTSEEFLTDELGLKGLGIISEINESDIRRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHC
TPKLRAPMSDDDDQSRMRRRV
CHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MESVESQQISIGQILSILRKHIGLIFASTFIVTLLAAFMTFFVMTPKYSATTQILVNRKL
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHECCCC
SDDMAGAQLQQTQADVQMISTYKDIITSPTVLKTVNTKLQGQPGYEKGDVDSLKGSLSVN
CCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEC
SQQNSQVFSITAKSTNPNTAAKMANETATTFKNKVVKIMSINNVSIVSKATADDQPVSPR
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCCCCCCCCCC
TKLNIAAGLAVGLLLGMGLAFLREFSDRTVTSEEFLTDELGLKGLGIISEINESDIRRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHC
TPKLRAPMSDDDDQSRMRRRV
CHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]