Click here to switch to the map view.

The map label for this gene is ywqD [H]

Identifier: 116492361

GI number: 116492361

Start: 621575

End: 622306

Strand: Direct

Name: ywqD [H]

Synonym: PEPE_0566

Alternate gene names: 116492361

Gene position: 621575-622306 (Clockwise)

Preceding gene: 116492360

Following gene: 116492362

Centisome position: 33.92

GC content: 43.58

Gene sequence:

>732_bases
ATGTTTAAGAAGAAACAAAAGCTAGATAACGAAAGTCTTAAAAATGGTGTGGGATTAGTTACCTTTACTGATCCGACTTC
CACGATTGCAGAACAATTTAGAACGGTGCGGACTAACATTCAATTTTCATCAGTCGATAAGGCATTGAAATCAATTGTCT
TTACTTCATCCGCACCATCGGAAGGGAAGTCGACGGTAAGTAACAATGTGGCAGTCACTTGGGCGGATCAAGGCAAGCGC
GTTTTGATTGTCGATGCGGATATGCGTCGTCCTACTGTACATCGTACCTTTAGTGTCAGCAATGCGGTCGGATTGAGCAA
CCTCCTGGCGGAGACTGGTAGCTTGGAAAATGCTATCCATGAAACAATCATTAATAATCTTTCGGTAATGCCAAGTGGAC
CGATTCCACCTAATCCATCGGAATTATTAGGTTCAGGAAAGATGGCGGCCCTATTAGACCAATTAACCGATCACTATGAT
CTCGTGATTATTGATGCACCACCGGTCAATACAGTAACCGACGCTCAAGTTTTAGCAGCGCGTGCGGATGGAACGATTTT
AGTAGTTCCGCAAGGAATTGCCGATAAAGCGGGTGTCCGTCATGCTAAGCAATTACTTGAAGCAGTCCAAGCTAACATTC
TAGGGGCAATCTTAAACCGAGCAACCGCTGAAAAATCAACAGGTTATTACGGTGGTTACTATGGTGGTTATTATGGGACG
GATAATAAATAA

Upstream 100 bases:

>100_bases
CGAAAGTGATATTCGTCGTAAAATCACACCAAAACTTAGAGCACCAATGAGTGATGATGATGATCAATCTAGAATGCGGA
GAAGGGTATAGGTAATCGAA

Downstream 100 bases:

>100_bases
TGATGAATTTAATTGATTTACATTGTCATATACTGCCAGGTGTCGACGACGGTGCCAAAGATTTACCAATGGCACTCGAC
ATGGCTCGTGAAGCAGTTAA

Product: tyrosine-protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MFKKKQKLDNESLKNGVGLVTFTDPTSTIAEQFRTVRTNIQFSSVDKALKSIVFTSSAPSEGKSTVSNNVAVTWADQGKR
VLIVDADMRRPTVHRTFSVSNAVGLSNLLAETGSLENAIHETIINNLSVMPSGPIPPNPSELLGSGKMAALLDQLTDHYD
LVIIDAPPVNTVTDAQVLAARADGTILVVPQGIADKAGVRHAKQLLEAVQANILGAILNRATAEKSTGYYGGYYGGYYGT
DNK

Sequences:

>Translated_243_residues
MFKKKQKLDNESLKNGVGLVTFTDPTSTIAEQFRTVRTNIQFSSVDKALKSIVFTSSAPSEGKSTVSNNVAVTWADQGKR
VLIVDADMRRPTVHRTFSVSNAVGLSNLLAETGSLENAIHETIINNLSVMPSGPIPPNPSELLGSGKMAALLDQLTDHYD
LVIIDAPPVNTVTDAQVLAARADGTILVVPQGIADKAGVRHAKQLLEAVQANILGAILNRATAEKSTGYYGGYYGGYYGT
DNK
>Mature_243_residues
MFKKKQKLDNESLKNGVGLVTFTDPTSTIAEQFRTVRTNIQFSSVDKALKSIVFTSSAPSEGKSTVSNNVAVTWADQGKR
VLIVDADMRRPTVHRTFSVSNAVGLSNLLAETGSLENAIHETIINNLSVMPSGPIPPNPSELLGSGKMAALLDQLTDHYD
LVIIDAPPVNTVTDAQVLAARADGTILVVPQGIADKAGVRHAKQLLEAVQANILGAILNRATAEKSTGYYGGYYGGYYGT
DNK

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=229, Percent_Identity=34.4978165938865, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87082032, Length=220, Percent_Identity=33.6363636363636, Blast_Score=130, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 25931; Mature: 25931

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKKQKLDNESLKNGVGLVTFTDPTSTIAEQFRTVRTNIQFSSVDKALKSIVFTSSAPS
CCCHHHHCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
EGKSTVSNNVAVTWADQGKRVLIVDADMRRPTVHRTFSVSNAVGLSNLLAETGSLENAIH
CCCHHHCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHH
ETIINNLSVMPSGPIPPNPSELLGSGKMAALLDQLTDHYDLVIIDAPPVNTVTDAQVLAA
HHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHEE
RADGTILVVPQGIADKAGVRHAKQLLEAVQANILGAILNRATAEKSTGYYGGYYGGYYGT
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DNK
CCC
>Mature Secondary Structure
MFKKKQKLDNESLKNGVGLVTFTDPTSTIAEQFRTVRTNIQFSSVDKALKSIVFTSSAPS
CCCHHHHCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
EGKSTVSNNVAVTWADQGKRVLIVDADMRRPTVHRTFSVSNAVGLSNLLAETGSLENAIH
CCCHHHCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHH
ETIINNLSVMPSGPIPPNPSELLGSGKMAALLDQLTDHYDLVIIDAPPVNTVTDAQVLAA
HHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHEE
RADGTILVVPQGIADKAGVRHAKQLLEAVQANILGAILNRATAEKSTGYYGGYYGGYYGT
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DNK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]