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The map label for this gene is int [H]

Identifier: 116492336

GI number: 116492336

Start: 598886

End: 600040

Strand: Direct

Name: int [H]

Synonym: PEPE_0540

Alternate gene names: 116492336

Gene position: 598886-600040 (Clockwise)

Preceding gene: 116492332

Following gene: 116492338

Centisome position: 32.68

GC content: 44.16

Gene sequence:

>1155_bases
ATGGCAAAAATTAAAAAATATACAACAAAAACAGGAAAAATTAGATATGAATTTCAGGTGTACGCGGGAGTTGACTCTCT
AACCGGACGCCAAAAGACCACGAGAAGACGTGGCTTTAAGACGAGGAAAGAGGCCTCCATCGTATTGAGTAGATTAGAAT
TGGAAATCGAAAAAAGAGGACTACAGGAGGATGAGAGACGCTTTTTCAGGGATGTTTGCGCGGAGTGGATGGAACAGTAC
CGTTTAACAGTGCGAGAGTCTACCTTAGAGAAGACCCAACGGATTATCAATATCCATGTACTACCTGCCTTCGGAGATAT
GGTAATTAATAATATAACTCCGAACGTCTGCCAAAAAGTTGTTAATAAGTGGTTTTTGGAGGCTAAGTCCTACAAAAAAT
GGCTGAATTACGCTTCGATGATTTTTGATTATGCTCTCAGAGCCGAGTACGTGGGGCGGAACCCTTGCACGCTGGTAACA
ATGCCACGAGTACAGGAACAGGCAGGCGAAAAGTTAGAAAACTTCTGGACCAGAGACGAACTGAATACCTTTTTCGATTA
CGTGACTCCCGAAAGAGACGTAGAACAATTCACGATGTTCAGGGTGTTGGCTTATTCTGGTATCAGAAAAGGGGAATTAC
TAGCGCTAACGTGGAAGGATATCAACTTTGAGGACAATACGTTGCGGGTCAATAAGACCCTAACGCAGGGATTAGGTGGG
AAGCTAATCGTACAACCTCCGAAGAGTAGGGCTGGACGCCGTACAATCGACTTGGATGACAGTACCATGCGATACCTCAG
GCAATGGAAGGGTGTTCAACGCGAGACTTTTCTGGGGATGGGCTTCAATACTAACAATGTTGATCAGTTAGTATTTGCTA
GCAATAGAAATCATTTTCGCTCCATGAACACCCCCACCAAATGGCTTAATAAAGCTATTAAAGCCACGGGACTCAAACAC
ATCTCAATTCATGGGTTTAGGCACACACACGCCTCACTACTGTATCAGTCTGGAGTAGGTCTTAAGGAGACTCAACAGAG
ATTGGGACACTCAAGAGCAGACAGTAGCGTTACGCTCGACGTGTACACTCATACGACAGAACAACAGAATGTAGCAGCTT
TGCAGAGGTTTGAAAATTACGTTGAGGCCAAATAA

Upstream 100 bases:

>100_bases
AACATGTAGCTGTTGCGGGTCTGACTCTGCAACACGGGAGGTCATCCCAATATTTTCAAAAAATGTGAGCCTCGCAAGCA
ACACAGGAGCGAAAATAAAA

Downstream 100 bases:

>100_bases
CTAAAATTGGCTAAGCTTTATAGAATTTTTTGTAAAAAATAAGTGCTTTAAACCTTGCCATAATAGGAATAAGTACCAAA
AAAATTGGCTAAGCTTTTGG

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MAKIKKYTTKTGKIRYEFQVYAGVDSLTGRQKTTRRRGFKTRKEASIVLSRLELEIEKRGLQEDERRFFRDVCAEWMEQY
RLTVRESTLEKTQRIINIHVLPAFGDMVINNITPNVCQKVVNKWFLEAKSYKKWLNYASMIFDYALRAEYVGRNPCTLVT
MPRVQEQAGEKLENFWTRDELNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLALTWKDINFEDNTLRVNKTLTQGLGG
KLIVQPPKSRAGRRTIDLDDSTMRYLRQWKGVQRETFLGMGFNTNNVDQLVFASNRNHFRSMNTPTKWLNKAIKATGLKH
ISIHGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLDVYTHTTEQQNVAALQRFENYVEAK

Sequences:

>Translated_384_residues
MAKIKKYTTKTGKIRYEFQVYAGVDSLTGRQKTTRRRGFKTRKEASIVLSRLELEIEKRGLQEDERRFFRDVCAEWMEQY
RLTVRESTLEKTQRIINIHVLPAFGDMVINNITPNVCQKVVNKWFLEAKSYKKWLNYASMIFDYALRAEYVGRNPCTLVT
MPRVQEQAGEKLENFWTRDELNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLALTWKDINFEDNTLRVNKTLTQGLGG
KLIVQPPKSRAGRRTIDLDDSTMRYLRQWKGVQRETFLGMGFNTNNVDQLVFASNRNHFRSMNTPTKWLNKAIKATGLKH
ISIHGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLDVYTHTTEQQNVAALQRFENYVEAK
>Mature_383_residues
AKIKKYTTKTGKIRYEFQVYAGVDSLTGRQKTTRRRGFKTRKEASIVLSRLELEIEKRGLQEDERRFFRDVCAEWMEQYR
LTVRESTLEKTQRIINIHVLPAFGDMVINNITPNVCQKVVNKWFLEAKSYKKWLNYASMIFDYALRAEYVGRNPCTLVTM
PRVQEQAGEKLENFWTRDELNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLALTWKDINFEDNTLRVNKTLTQGLGGK
LIVQPPKSRAGRRTIDLDDSTMRYLRQWKGVQRETFLGMGFNTNNVDQLVFASNRNHFRSMNTPTKWLNKAIKATGLKHI
SIHGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLDVYTHTTEQQNVAALQRFENYVEAK

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44838; Mature: 44707

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKKYTTKTGKIRYEFQVYAGVDSLTGRQKTTRRRGFKTRKEASIVLSRLELEIEKRG
CCCCCCCCCCCCEEEEEEEEEECCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
LQEDERRFFRDVCAEWMEQYRLTVRESTLEKTQRIINIHVLPAFGDMVINNITPNVCQKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCCCHHHHHHH
VNKWFLEAKSYKKWLNYASMIFDYALRAEYVGRNPCTLVTMPRVQEQAGEKLENFWTRDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
LNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLALTWKDINFEDNTLRVNKTLTQGLGG
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEHHHHHCCCC
KLIVQPPKSRAGRRTIDLDDSTMRYLRQWKGVQRETFLGMGFNTNNVDQLVFASNRNHFR
EEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCHHHEEECCCCCCCCCCEEEECCCCCCC
SMNTPTKWLNKAIKATGLKHISIHGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLD
CCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEE
VYTHTTEQQNVAALQRFENYVEAK
EEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKIKKYTTKTGKIRYEFQVYAGVDSLTGRQKTTRRRGFKTRKEASIVLSRLELEIEKRG
CCCCCCCCCCCEEEEEEEEEECCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
LQEDERRFFRDVCAEWMEQYRLTVRESTLEKTQRIINIHVLPAFGDMVINNITPNVCQKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCCCHHHHHHH
VNKWFLEAKSYKKWLNYASMIFDYALRAEYVGRNPCTLVTMPRVQEQAGEKLENFWTRDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
LNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLALTWKDINFEDNTLRVNKTLTQGLGG
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEHHHHHCCCC
KLIVQPPKSRAGRRTIDLDDSTMRYLRQWKGVQRETFLGMGFNTNNVDQLVFASNRNHFR
EEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCHHHEEECCCCCCCCCCEEEECCCCCCC
SMNTPTKWLNKAIKATGLKHISIHGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLD
CCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEE
VYTHTTEQQNVAALQRFENYVEAK
EEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]