| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492332
Identifier: 116492332
GI number: 116492332
Start: 595035
End: 595256
Strand: Direct
Name: 116492332
Synonym: PEPE_0536
Alternate gene names: NA
Gene position: 595035-595256 (Clockwise)
Preceding gene: 116492331
Following gene: 116492336
Centisome position: 32.47
GC content: 44.59
Gene sequence:
>222_bases ATGTCCCAGTCCTTGAGTGACTCGGCTGGTCCGTCCTATGCTGTCGCTGGTGGCTCTGTCCTTGCTGCTGGTTTGCCTAT GTGTCTATGCCTAGTTACTTATGTGCTTGCCTTATGGTATCAGGGTATTATGTTGATGTATGTGCATGGTATGACTATGC TTATGCTAGTGTCTTGCTTGTGGTGGAGGGTTAAGATTTTTGGAATCTCAAAATTAAAATGA
Upstream 100 bases:
>100_bases GTATGATGGATGTATATAGGTATATAGGTATATAGGTATATAGGTGTATGGTTGTATATAGGTGTATGTAGGTGCGTCTT GTGTCACGTGCTTGTGGTCT
Downstream 100 bases:
>100_bases AAAATTAAATAAAAAATATATGTGGCTCTAGCTAATCGGCTGGAGCTTTTTTGTTATACATATAATGAATGTTTATACAA AACAATGAATATAATTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MSQSLSDSAGPSYAVAGGSVLAAGLPMCLCLVTYVLALWYQGIMLMYVHGMTMLMLVSCLWWRVKIFGISKLK
Sequences:
>Translated_73_residues MSQSLSDSAGPSYAVAGGSVLAAGLPMCLCLVTYVLALWYQGIMLMYVHGMTMLMLVSCLWWRVKIFGISKLK >Mature_72_residues SQSLSDSAGPSYAVAGGSVLAAGLPMCLCLVTYVLALWYQGIMLMYVHGMTMLMLVSCLWWRVKIFGISKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7964; Mature: 7833
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 9.6 %Met (Translated Protein) 13.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 12.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLSDSAGPSYAVAGGSVLAAGLPMCLCLVTYVLALWYQGIMLMYVHGMTMLMLVSCL CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWRVKIFGISKLK HHHHHHHHHHCCC >Mature Secondary Structure SQSLSDSAGPSYAVAGGSVLAAGLPMCLCLVTYVLALWYQGIMLMYVHGMTMLMLVSCL CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWRVKIFGISKLK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA