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The map label for this gene is 116492333

Identifier: 116492333

GI number: 116492333

Start: 595591

End: 597213

Strand: Reverse

Name: 116492333

Synonym: PEPE_0537

Alternate gene names: NA

Gene position: 597213-595591 (Counterclockwise)

Preceding gene: 116492334

Following gene: 116492327

Centisome position: 32.59

GC content: 35.74

Gene sequence:

>1623_bases
ATGGAAAATAATAAAATTTCTATATCGATCAATTGTGGAGAGCCAGGAAGTGGCAAAACTACGAAATTGATTGAAGAAGC
AATGGAAATATTAGCAAAAGGCGAAAGTTTATATATTCTAAGTCCCACCCACAAATCAAAGTCACAGTTGAATAAAGCTA
TCAACAAAGCCGTTGAAACAACTGGCGATAACACCTATAAAGAGCTATTTTCCAGCCTCCATGTATTGGGTAATAACTAT
GTAGGTGAAGCCAATATATTACTAGATGAAATCAGTATGCTATCACTTGATAATTTGTACTCTATTCTATTCAAGGCGAG
ACGTCATGCGAAAAAAATGCTTATGTTCGGTGATATAGGACAATTACCACCACCACGAGGCGTTGGAACGCTTGAGTATC
TATTGCGCTACAATTCTAGGGTTCTTAATATCGACCCTCATAACTTTTGGAAAGGCATCTCGTCACTTTACGAACATAGT
ACCAACATAGAGCTGAACATTCCTAGACAGTGGAAAGATGACATATATTCAATCAACCTTAATATATTACAAAAAAACTA
CCGTCTTAATTTTGAAAGTGGATTAACCCATTATGATGATAATTTCTATGATTATGTCTTTAAGTCAATCATTGAGAAAG
ATGACTATACACAGGAATTAGTTAACAGTCTTAAAGAAAGCAGATTAATTATTGCGCCCTCTCATAGTCTAATTAACAGC
ATAGATGACCTGCTACAGTCACATTATGGCAATAACTATAATCAAGTAGCACCATTTGTTCGCGTTGGCTCCAGAGGTCC
AGGAGGAAAGACGTATGTTAATCCAGAACACCCTCATTATGCACAATTACTCAATAGATTTTATAGTATTGGAGCGATGC
CCAACAATACAATGGAGAATTACACACCTACCAGTGCCGTAACCGCGCACTATATTGAAGGAATCGAAAATGATGGAGTC
ACCTTCTATTTGGGAAAAAGAGAAATTACTAGCTCAAACAATAATACACACTTTCTGAACAACAACATGTTATATACGGC
CGTCTCTCGGGCGAAAAGCCCTAATAAGGTTGTGTTATTAGGAAAAAGAGAAACTTTTGAAAAAATGCGTCAAACTATGC
CCATAGAAATTGATATAACAGCCAATAATATTGTTAATCAAAACGCTAAAAAAAATACTATGACGAAAATTAAAAATAGT
AGTAACATTCTATCCGTTGATGACATTTATAACCTCTTTTTGGAGGAGTTTGAGAAAGAGAAAGTACAGGGTAAGTATGA
TGACTTATTGGACCTAACCCCAGAAAAGCCTCGTTATATAATGAACCAATTTAATCCGAGATGTAAAAATTTTAAAACAC
TACCACAGGGATATGGACAACACTACGACAATTGGAATAAGGAACAACTCAATAAGGGTAACTCTAAGGGTGGAAAAAAT
AAAAAAGGCCGTGGCAAAGTACAACAATATGTGGCAGACCTATTTCACAATAACCTGGAAGAGTTCAACGCCCTCAAGGA
AGAAGCCCTTAGCAAAGTGTCACCAAACGATTTTCAAAATCATCGTGGTTATAACAAATACTCTGTTAAGGATGCAATTA
CTAAGATTGAAGCAATTAATTAA

Upstream 100 bases:

>100_bases
TCAATAATAAATAACCCGTTTTAAAATAGTCCCCCTCCTAATATATAAGCATAGGGACTAAAACAAAATATAAAAAATAA
ATTAACTAAGGATTGAAATA

Downstream 100 bases:

>100_bases
CAAATACTCATCCCCTTTTAACACACAAATGGGGATGCATTATACATAAATCAACCTAAAAAGTTGATGTGGTACCTTGT
ACGTATACAAAAGGTTGCGT

Product: RecD related helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MENNKISISINCGEPGSGKTTKLIEEAMEILAKGESLYILSPTHKSKSQLNKAINKAVETTGDNTYKELFSSLHVLGNNY
VGEANILLDEISMLSLDNLYSILFKARRHAKKMLMFGDIGQLPPPRGVGTLEYLLRYNSRVLNIDPHNFWKGISSLYEHS
TNIELNIPRQWKDDIYSINLNILQKNYRLNFESGLTHYDDNFYDYVFKSIIEKDDYTQELVNSLKESRLIIAPSHSLINS
IDDLLQSHYGNNYNQVAPFVRVGSRGPGGKTYVNPEHPHYAQLLNRFYSIGAMPNNTMENYTPTSAVTAHYIEGIENDGV
TFYLGKREITSSNNNTHFLNNNMLYTAVSRAKSPNKVVLLGKRETFEKMRQTMPIEIDITANNIVNQNAKKNTMTKIKNS
SNILSVDDIYNLFLEEFEKEKVQGKYDDLLDLTPEKPRYIMNQFNPRCKNFKTLPQGYGQHYDNWNKEQLNKGNSKGGKN
KKGRGKVQQYVADLFHNNLEEFNALKEEALSKVSPNDFQNHRGYNKYSVKDAITKIEAIN

Sequences:

>Translated_540_residues
MENNKISISINCGEPGSGKTTKLIEEAMEILAKGESLYILSPTHKSKSQLNKAINKAVETTGDNTYKELFSSLHVLGNNY
VGEANILLDEISMLSLDNLYSILFKARRHAKKMLMFGDIGQLPPPRGVGTLEYLLRYNSRVLNIDPHNFWKGISSLYEHS
TNIELNIPRQWKDDIYSINLNILQKNYRLNFESGLTHYDDNFYDYVFKSIIEKDDYTQELVNSLKESRLIIAPSHSLINS
IDDLLQSHYGNNYNQVAPFVRVGSRGPGGKTYVNPEHPHYAQLLNRFYSIGAMPNNTMENYTPTSAVTAHYIEGIENDGV
TFYLGKREITSSNNNTHFLNNNMLYTAVSRAKSPNKVVLLGKRETFEKMRQTMPIEIDITANNIVNQNAKKNTMTKIKNS
SNILSVDDIYNLFLEEFEKEKVQGKYDDLLDLTPEKPRYIMNQFNPRCKNFKTLPQGYGQHYDNWNKEQLNKGNSKGGKN
KKGRGKVQQYVADLFHNNLEEFNALKEEALSKVSPNDFQNHRGYNKYSVKDAITKIEAIN
>Mature_540_residues
MENNKISISINCGEPGSGKTTKLIEEAMEILAKGESLYILSPTHKSKSQLNKAINKAVETTGDNTYKELFSSLHVLGNNY
VGEANILLDEISMLSLDNLYSILFKARRHAKKMLMFGDIGQLPPPRGVGTLEYLLRYNSRVLNIDPHNFWKGISSLYEHS
TNIELNIPRQWKDDIYSINLNILQKNYRLNFESGLTHYDDNFYDYVFKSIIEKDDYTQELVNSLKESRLIIAPSHSLINS
IDDLLQSHYGNNYNQVAPFVRVGSRGPGGKTYVNPEHPHYAQLLNRFYSIGAMPNNTMENYTPTSAVTAHYIEGIENDGV
TFYLGKREITSSNNNTHFLNNNMLYTAVSRAKSPNKVVLLGKRETFEKMRQTMPIEIDITANNIVNQNAKKNTMTKIKNS
SNILSVDDIYNLFLEEFEKEKVQGKYDDLLDLTPEKPRYIMNQFNPRCKNFKTLPQGYGQHYDNWNKEQLNKGNSKGGKN
KKGRGKVQQYVADLFHNNLEEFNALKEEALSKVSPNDFQNHRGYNKYSVKDAITKIEAIN

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61782; Mature: 61782

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNKISISINCGEPGSGKTTKLIEEAMEILAKGESLYILSPTHKSKSQLNKAINKAVET
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHC
TGDNTYKELFSSLHVLGNNYVGEANILLDEISMLSLDNLYSILFKARRHAKKMLMFGDIG
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QLPPPRGVGTLEYLLRYNSRVLNIDPHNFWKGISSLYEHSTNIELNIPRQWKDDIYSINL
CCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHCCCEEEEEE
NILQKNYRLNFESGLTHYDDNFYDYVFKSIIEKDDYTQELVNSLKESRLIIAPSHSLINS
EEEECCCEEEHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEECCHHHHHH
IDDLLQSHYGNNYNQVAPFVRVGSRGPGGKTYVNPEHPHYAQLLNRFYSIGAMPNNTMEN
HHHHHHHHCCCCHHHHCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
YTPTSAVTAHYIEGIENDGVTFYLGKREITSSNNNTHFLNNNMLYTAVSRAKSPNKVVLL
CCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEECCCEEEEEHHHCCCCCEEEEE
GKRETFEKMRQTMPIEIDITANNIVNQNAKKNTMTKIKNSSNILSVDDIYNLFLEEFEKE
CCHHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
KVQGKYDDLLDLTPEKPRYIMNQFNPRCKNFKTLPQGYGQHYDNWNKEQLNKGNSKGGKN
HHCCCHHHHHCCCCCCCHHHHHCCCCHHCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCC
KKGRGKVQQYVADLFHNNLEEFNALKEEALSKVSPNDFQNHRGYNKYSVKDAITKIEAIN
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MENNKISISINCGEPGSGKTTKLIEEAMEILAKGESLYILSPTHKSKSQLNKAINKAVET
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHC
TGDNTYKELFSSLHVLGNNYVGEANILLDEISMLSLDNLYSILFKARRHAKKMLMFGDIG
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QLPPPRGVGTLEYLLRYNSRVLNIDPHNFWKGISSLYEHSTNIELNIPRQWKDDIYSINL
CCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHCCCEEEEEE
NILQKNYRLNFESGLTHYDDNFYDYVFKSIIEKDDYTQELVNSLKESRLIIAPSHSLINS
EEEECCCEEEHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEECCHHHHHH
IDDLLQSHYGNNYNQVAPFVRVGSRGPGGKTYVNPEHPHYAQLLNRFYSIGAMPNNTMEN
HHHHHHHHCCCCHHHHCHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
YTPTSAVTAHYIEGIENDGVTFYLGKREITSSNNNTHFLNNNMLYTAVSRAKSPNKVVLL
CCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEECCCEEEEEHHHCCCCCEEEEE
GKRETFEKMRQTMPIEIDITANNIVNQNAKKNTMTKIKNSSNILSVDDIYNLFLEEFEKE
CCHHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
KVQGKYDDLLDLTPEKPRYIMNQFNPRCKNFKTLPQGYGQHYDNWNKEQLNKGNSKGGKN
HHCCCHHHHHCCCCCCCHHHHHCCCCHHCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCC
KKGRGKVQQYVADLFHNNLEEFNALKEEALSKVSPNDFQNHRGYNKYSVKDAITKIEAIN
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA