Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492304

Identifier: 116492304

GI number: 116492304

Start: 558257

End: 558595

Strand: Direct

Name: 116492304

Synonym: PEPE_0504

Alternate gene names: NA

Gene position: 558257-558595 (Clockwise)

Preceding gene: 116492303

Following gene: 116492305

Centisome position: 30.47

GC content: 46.61

Gene sequence:

>339_bases
ATGACGATTAAGGTCGGCCACCAGTTTGCGTGCGAAGGCCATCTTCTCGTCGAATTCGGTCATGTGCAAAGTAAACGGGA
CGCTTTGGTAATTAAAGTTTTCGCCGATATAGCCCGGATCAGTCACGTAGCGCAAGTTGTTTTCGTCGTGGCGACTGCCC
GGTTTCAGGACGGTATCCAAATACTGATAGAGAATCGTTGGATCGTAGTTCAGCGGCTTATCAAGGGTCGTGGAAAGCTT
GTAGCCGGTTGCTTGACCAGCAAATTGTTCGTTGATTTAGACTTGGGTAAGGCTTTGATACAATTTCAAAACGATCACTC
CTCTTCTTTTCACTTTTAG

Upstream 100 bases:

>100_bases
GAGAGAAGCATCGCGACTAGGAAAGGAGGGCAACAGGATTGCTTTAATCAACAAAGACCAGTTCGATAGTTTCATCTTCC
GGTTTGATGTTGACAGATAA

Downstream 100 bases:

>100_bases
TATAGCAGTTATGGTAGATTGTAAAATTAATCCGAACGCTGATCTTTTTTGTCCGAACAGCGTTCGGATTAATTTTACAA
TCTACCTTTTACCAAGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQILIENRWIVVQRLIKGRGKL
VAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF

Sequences:

>Translated_112_residues
MTIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQILIENRWIVVQRLIKGRGKL
VAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF
>Mature_111_residues
TIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQILIENRWIVVQRLIKGRGKLV
AGCLTSKLFVDLDLGKALIQFQNDHSSSFHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12541; Mature: 12410

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQ
CEEECCCEEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ILIENRWIVVQRLIKGRGKLVAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF
EEEECCHHHHHHHHCCCCCEEEHHHHHHHEEEECCCHHEEEECCCCCCCCCC
>Mature Secondary Structure 
TIKVGHQFACEGHLLVEFGHVQSKRDALVIKVFADIARISHVAQVVFVVATARFQDGIQ
EEECCCEEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ILIENRWIVVQRLIKGRGKLVAGCLTSKLFVDLDLGKALIQFQNDHSSSFHF
EEEECCHHHHHHHHCCCCCEEEHHHHHHHEEEECCCHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA