Click here to switch to the map view.

The map label for this gene is ywpJ [H]

Identifier: 116492270

GI number: 116492270

Start: 521275

End: 522147

Strand: Reverse

Name: ywpJ [H]

Synonym: PEPE_0468

Alternate gene names: 116492270

Gene position: 522147-521275 (Counterclockwise)

Preceding gene: 116492274

Following gene: 116492269

Centisome position: 28.5

GC content: 40.78

Gene sequence:

>873_bases
ATGATTTCAATTATCGCTTCAGATATGGATGGAACACTTCTTAACGAAGAAATGCAGATTTCAAGTGCCAACGCAGATGC
TATTAAAAAGGCCCAAGCTGCTGGGGTTCATTTTGCAGTGGCCACTGGTCGTGAATATCGTGAAGCCAAACCTTTGCTTG
AAGCATACGGACTATCGGTCCCACTAATTACTTTAAACGGAGCCGCTGTTTTCGACGTCGATGGTAAAGCTTTAGATATG
GTTCCTATTACTAAGCCATCAGCCGTCTTGATCATGCATCAACTAGAAAAAGCCGGTCTTTACTATGAAATTACAACTAA
CCAAGGCGTCGTTTCTAATAGTCGCACTCGTCGAATTCAAACCGTAGCTCATTTGCTTGAAACGGTTAACCCAGACACAC
CTTTCAAATTAGCAGTCGCTATGTCATCAGCACGGGTGGAACTAATGAACATTCGCTACGTGGATGATTACCAAGTTTTA
ATTGACGATCCGAAGATTCAAGTGCTTAAACTTGTGGCTTTTGGTGAAAATGGACAAAAGGGGTTGCAACCCGTTCGTGA
AGCTTTACATGCTAAAGTTGATGTTGCCATTTCATCTTCTTTTGAAAATAACATCGAAATCAATAATCCCCGTGCCCAAA
AAGGAATTGCGGTTCAACACTTTGCTGATGAATTGAACGTTCCCATGTCACAAGTAATGACCATCGGTGATAATATGAAT
GATGCTTCTATGTTAAAAATCGCTGGTGTTAGTTACGCCATGGGTAATGCGATTCCGGAAATTAAAAAACTTGCTAATCA
TCTGACCGTTACTAATAATGAAAATGGGGTTGCTAAAGCCATTCTTGAGCAACTTGATGAAAACCATCAGTAA

Upstream 100 bases:

>100_bases
CTTAATACAATTTTATTACTTCTATTCTAACTGATTTAGTAAAAAAAAAGCTATGTCATGTTAGAATTAACATAAATACA
TGGATTGGATGTGCTTATAA

Downstream 100 bases:

>100_bases
AACGAGGCTATGCTATGCGTAGATTTTATCTAAAAAGCCAAGGACTCGAAAATAAGGGAGCTACCATTGTCAGCGATGAA
AAGCACAACTCCAAATATCT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MISIIASDMDGTLLNEEMQISSANADAIKKAQAAGVHFAVATGREYREAKPLLEAYGLSVPLITLNGAAVFDVDGKALDM
VPITKPSAVLIMHQLEKAGLYYEITTNQGVVSNSRTRRIQTVAHLLETVNPDTPFKLAVAMSSARVELMNIRYVDDYQVL
IDDPKIQVLKLVAFGENGQKGLQPVREALHAKVDVAISSSFENNIEINNPRAQKGIAVQHFADELNVPMSQVMTIGDNMN
DASMLKIAGVSYAMGNAIPEIKKLANHLTVTNNENGVAKAILEQLDENHQ

Sequences:

>Translated_290_residues
MISIIASDMDGTLLNEEMQISSANADAIKKAQAAGVHFAVATGREYREAKPLLEAYGLSVPLITLNGAAVFDVDGKALDM
VPITKPSAVLIMHQLEKAGLYYEITTNQGVVSNSRTRRIQTVAHLLETVNPDTPFKLAVAMSSARVELMNIRYVDDYQVL
IDDPKIQVLKLVAFGENGQKGLQPVREALHAKVDVAISSSFENNIEINNPRAQKGIAVQHFADELNVPMSQVMTIGDNMN
DASMLKIAGVSYAMGNAIPEIKKLANHLTVTNNENGVAKAILEQLDENHQ
>Mature_290_residues
MISIIASDMDGTLLNEEMQISSANADAIKKAQAAGVHFAVATGREYREAKPLLEAYGLSVPLITLNGAAVFDVDGKALDM
VPITKPSAVLIMHQLEKAGLYYEITTNQGVVSNSRTRRIQTVAHLLETVNPDTPFKLAVAMSSARVELMNIRYVDDYQVL
IDDPKIQVLKLVAFGENGQKGLQPVREALHAKVDVAISSSFENNIEINNPRAQKGIAVQHFADELNVPMSQVMTIGDNMN
DASMLKIAGVSYAMGNAIPEIKKLANHLTVTNNENGVAKAILEQLDENHQ

Specific function: Putative phosphatase (Potential) [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=298, Percent_Identity=31.2080536912752, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786982, Length=289, Percent_Identity=26.2975778546713, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI48994981, Length=287, Percent_Identity=25.7839721254355, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787043, Length=292, Percent_Identity=26.7123287671233, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 31505; Mature: 31505

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIIASDMDGTLLNEEMQISSANADAIKKAQAAGVHFAVATGREYREAKPLLEAYGLSV
CEEEEECCCCCCEECCCCEECCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCEE
PLITLNGAAVFDVDGKALDMVPITKPSAVLIMHQLEKAGLYYEITTNQGVVSNSRTRRIQ
EEEEECCEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCEECCCHHHHHH
TVAHLLETVNPDTPFKLAVAMSSARVELMNIRYVDDYQVLIDDPKIQVLKLVAFGENGQK
HHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCEEEEEECCCEEEEEEEEECCCCHH
GLQPVREALHAKVDVAISSSFENNIEINNPRAQKGIAVQHFADELNVPMSQVMTIGDNMN
HHHHHHHHHHCEEEEEEECCCCCCEEECCCCCCCCEEHHHHHHHHCCCHHHHEECCCCCC
DASMLKIAGVSYAMGNAIPEIKKLANHLTVTNNENGVAKAILEQLDENHQ
CCCEEEEECCHHHHCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISIIASDMDGTLLNEEMQISSANADAIKKAQAAGVHFAVATGREYREAKPLLEAYGLSV
CEEEEECCCCCCEECCCCEECCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCEE
PLITLNGAAVFDVDGKALDMVPITKPSAVLIMHQLEKAGLYYEITTNQGVVSNSRTRRIQ
EEEEECCEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCEECCCHHHHHH
TVAHLLETVNPDTPFKLAVAMSSARVELMNIRYVDDYQVLIDDPKIQVLKLVAFGENGQK
HHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCEEEEEECCCEEEEEEEEECCCCHH
GLQPVREALHAKVDVAISSSFENNIEINNPRAQKGIAVQHFADELNVPMSQVMTIGDNMN
HHHHHHHHHHCEEEEEEECCCCCCEEECCCCCCCCEEHHHHHHHHCCCHHHHEECCCCCC
DASMLKIAGVSYAMGNAIPEIKKLANHLTVTNNENGVAKAILEQLDENHQ
CCCEEEEECCHHHHCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]