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The map label for this gene is 116492165

Identifier: 116492165

GI number: 116492165

Start: 407290

End: 407712

Strand: Reverse

Name: 116492165

Synonym: PEPE_0362

Alternate gene names: NA

Gene position: 407712-407290 (Counterclockwise)

Preceding gene: 116492167

Following gene: 116492164

Centisome position: 22.25

GC content: 39.01

Gene sequence:

>423_bases
ATGTTTCCAGAACGCTTACGTGCTTTAAGGCACGGAAAACACATTACTTTAGAAGTTCTTGCCAAGGGCTTGAACGAACT
TTTTCCAGATGAAACTCCCAATACATCCAGCCAGATTGGAAATTGGGAACGTGGTATTCGAACTCCCTCATACTTGGAAG
TAAAAAAACTTGCAGAATATTTCGATGTTAGTATGGATTACCTTTGTGGTCGTGCTGCCTTGAATGAATATGATTTAAGT
AAATTATTCCTATCAGGTCGCCAATTGAGCTTTGATCATAAGGTCCTTAGTAGCGACGATCGCTATGAAATTTTCCAATT
AATGGATGGTTATTTCCATGGTAAAAAACGTCGTACGCTAAGCCCTTCCGGTGAACAAGAAGAACTCGCTTTGAATTGGA
ATAAAACAAAGGACGAATCTTAA

Upstream 100 bases:

>100_bases
CGCCAAATCAATCCTCGTTTGTGACACTTACTTTAATTTGTCGCATTCCCCCATTCTGTATTAAAATGAGTATAGACAGA
TTGTCACAGGAGGATAGCAC

Downstream 100 bases:

>100_bases
TGAATCCTAAAAAATTAAAAAAACTAAAACGTCAATTAAAAAAGGAACGCCCCGTTTCAACAACTAACAACTATATTACT
CGCCTTGAGCGCTATCGTGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcription Regulator; Cro/CI Family Transcriptional Regulator

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MFPERLRALRHGKHITLEVLAKGLNELFPDETPNTSSQIGNWERGIRTPSYLEVKKLAEYFDVSMDYLCGRAALNEYDLS
KLFLSGRQLSFDHKVLSSDDRYEIFQLMDGYFHGKKRRTLSPSGEQEELALNWNKTKDES

Sequences:

>Translated_140_residues
MFPERLRALRHGKHITLEVLAKGLNELFPDETPNTSSQIGNWERGIRTPSYLEVKKLAEYFDVSMDYLCGRAALNEYDLS
KLFLSGRQLSFDHKVLSSDDRYEIFQLMDGYFHGKKRRTLSPSGEQEELALNWNKTKDES
>Mature_140_residues
MFPERLRALRHGKHITLEVLAKGLNELFPDETPNTSSQIGNWERGIRTPSYLEVKKLAEYFDVSMDYLCGRAALNEYDLS
KLFLSGRQLSFDHKVLSSDDRYEIFQLMDGYFHGKKRRTLSPSGEQEELALNWNKTKDES

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16277; Mature: 16277

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPERLRALRHGKHITLEVLAKGLNELFPDETPNTSSQIGNWERGIRTPSYLEVKKLAEY
CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHH
FDVSMDYLCGRAALNEYDLSKLFLSGRQLSFDHKVLSSDDRYEIFQLMDGYFHGKKRRTL
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCC
SPSGEQEELALNWNKTKDES
CCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MFPERLRALRHGKHITLEVLAKGLNELFPDETPNTSSQIGNWERGIRTPSYLEVKKLAEY
CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHH
FDVSMDYLCGRAALNEYDLSKLFLSGRQLSFDHKVLSSDDRYEIFQLMDGYFHGKKRRTL
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCC
SPSGEQEELALNWNKTKDES
CCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA