| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is nhaK [H]
Identifier: 116492167
GI number: 116492167
Start: 409013
End: 410989
Strand: Reverse
Name: nhaK [H]
Synonym: PEPE_0364
Alternate gene names: 116492167
Gene position: 410989-409013 (Counterclockwise)
Preceding gene: 116492168
Following gene: 116492165
Centisome position: 22.43
GC content: 37.23
Gene sequence:
>1977_bases ATGTCCATTGTATTTTTCGTTTTGATTTTAATCATCGCCACCGTTTTTTCAAACGCATTAGATACTAAAATCAAATTTTT ACCACGGGCTATTATTCAAATTATGATGGGGTTAGCACTTTCTTTCATCCCCAATTTTAATCATTTCAATCTTAACCCTG AAGTTTTCATGCTAGCAATTATTGCGCCGCTTATGTTTTACGACGGGATGAACACTAACATTGTCAAACTTAAACGTACT CTGAGTAATACCTTTTCTCTAGCCATTGGACTAGCCGTTGTCACGATTATTCTAGTTGGTTACTTAGGATATGCTTTATT ACCTCATATTCCGATTGCCCTTGCCTTTGCTTTAGCCGCTATTATTACCCCTACCGATGCGGTTGCAGTGTCATCCGTGA CCGAAAATCTAGATCTTCCTAATGAGGCCATGCTGAGTCTCAAAAATGAGTCTTTGTTTAACGATGCAAGTGGAATCGTA ATGTTTGATTTAGCTTTAACTGCCTTTCATACGGGACATTTTTCTCCGGTTCTAAGTATTTTTAATTACCTATATGTCTT CTTTGGTGGCTTAATTGTCGGCTGGATTGTCGGTTGGCTTTTTGTTCGCTTACAATTACTCTTAATTGAAACCGATATTG ATAACCCCAACATTATTGTCCCCATCAACTTCATTAAGCCTTTTGCTATCTACCTTCTGGCTGAAATGTTTGATACTTCC GGAATTTTGGCTGTGGTAGCAGCTGGATTGATTCAAAGTACTCAAGCTCAATCCCTGCGTCTTACTTCAACCAAAACTCA AATGGTGTCTAAAACCACCTACGAAATTTTTACTAACTTAATGAACGGTTTCGTTTTTATTCTTCTAGGAGTTTCATTTC CAACCGTCATCTACGATATTACCAATGAAGGCCGCCAGGTTTCTTCGCTAGGTTATCTCATTTTGGTTGGTATCATTTTG TACATCGTCATGATTATCATTCGCTACCTATGGGTTACTTTAAAACTAGCCAACATCCGTATCCGGCCAGCCGATAAAGT ACTTAATCATTTTTTAATTGCTATTAATGGTATTCATGGGACTATTACCCTATCGATGGCCTTTTCTATTCCAATTGTAT TACATGGTAAGATTTTTCCATTTCGCAATGATATTATTTTCATCGCGGCAACCGTCATCATTCTCAGCTTACTCGTGCCA AGTATTATCTTACCGTTGATGTTACCAGCCAAATCTTATTCCTACAGTTTAGAAGATATTAGCACCTACCGCCAAAAAAT GATTGAATACGCCATTAAACGCGTCCATGATGCCGATGAAGATCCAGTCGAAACGCAGGCGGTGATTGCTACTTTAAGAA GCCAACAGTCTATCTTACAACGTCCTAAACGAAACGCTACTTACAAAATTTTACAGAAATGTTTTAATTTAGAAGAGAAA CTACTTCAAGAGATGGTGGATAATGGTGAAATTAGCGTTAAACAACAAACTTTTTACGAAAGAATGTCATTGTTCCAAAG TTTCCAACTCCATCAATCGTTTATCCAGCACTTCATGTATCGAGCACGTTTTTACTTTATTAAATTAAGCCATCGTTTCA AACGACGCATTAAACGGGTAGATCCTTTGGTGGTTACCAAAAAATTCAATAATGCTCGAGACGAATTAGCTCAAGTAGAA AATGAAATATCGCCTCAGATTTTTGCTTATCTCAAAGAACATCTAAACGCAGACAATCGAGCAGAAATCCACTGGATTGA AGAGTACTATCGTGAACGCCATCGTCGTTTTCAAAATAACACTCGTGCTAACGAAATTCAGGAAGAACTTTTTATTAACG CCTTCCAAAATGAATATAACTTTATTCAAGAACAATTAGGAAAGAAAAATATTTCTCGTGAACTGGCCAGTTTGCTATAT GAACAGGTCTCCAATGACGAGTGGGTTTATATGCAAAATGATAGTATTTACGCATAA
Upstream 100 bases:
>100_bases CTAAAAATTAATATCCTCTATACCAAAGCCACAAAAATCGATTTTTTTGTGGCTTTTTGGTACGCTTGGTTTAGAGAAAC CAAAAAAGGAGTCGTTGTGC
Downstream 100 bases:
>100_bases AAAACTATGATAACAAGTCACCTTGCACTGCTTAGTGTCAGAGACAACCTGCTACCATAGTTTTTTTAATCCATATATTT ATCTAAAAATTTTTCAACTG
Product: NhaP-type Na+/H+ and K+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 658; Mature: 657
Protein sequence:
>658_residues MSIVFFVLILIIATVFSNALDTKIKFLPRAIIQIMMGLALSFIPNFNHFNLNPEVFMLAIIAPLMFYDGMNTNIVKLKRT LSNTFSLAIGLAVVTIILVGYLGYALLPHIPIALAFALAAIITPTDAVAVSSVTENLDLPNEAMLSLKNESLFNDASGIV MFDLALTAFHTGHFSPVLSIFNYLYVFFGGLIVGWIVGWLFVRLQLLLIETDIDNPNIIVPINFIKPFAIYLLAEMFDTS GILAVVAAGLIQSTQAQSLRLTSTKTQMVSKTTYEIFTNLMNGFVFILLGVSFPTVIYDITNEGRQVSSLGYLILVGIIL YIVMIIIRYLWVTLKLANIRIRPADKVLNHFLIAINGIHGTITLSMAFSIPIVLHGKIFPFRNDIIFIAATVIILSLLVP SIILPLMLPAKSYSYSLEDISTYRQKMIEYAIKRVHDADEDPVETQAVIATLRSQQSILQRPKRNATYKILQKCFNLEEK LLQEMVDNGEISVKQQTFYERMSLFQSFQLHQSFIQHFMYRARFYFIKLSHRFKRRIKRVDPLVVTKKFNNARDELAQVE NEISPQIFAYLKEHLNADNRAEIHWIEEYYRERHRRFQNNTRANEIQEELFINAFQNEYNFIQEQLGKKNISRELASLLY EQVSNDEWVYMQNDSIYA
Sequences:
>Translated_658_residues MSIVFFVLILIIATVFSNALDTKIKFLPRAIIQIMMGLALSFIPNFNHFNLNPEVFMLAIIAPLMFYDGMNTNIVKLKRT LSNTFSLAIGLAVVTIILVGYLGYALLPHIPIALAFALAAIITPTDAVAVSSVTENLDLPNEAMLSLKNESLFNDASGIV MFDLALTAFHTGHFSPVLSIFNYLYVFFGGLIVGWIVGWLFVRLQLLLIETDIDNPNIIVPINFIKPFAIYLLAEMFDTS GILAVVAAGLIQSTQAQSLRLTSTKTQMVSKTTYEIFTNLMNGFVFILLGVSFPTVIYDITNEGRQVSSLGYLILVGIIL YIVMIIIRYLWVTLKLANIRIRPADKVLNHFLIAINGIHGTITLSMAFSIPIVLHGKIFPFRNDIIFIAATVIILSLLVP SIILPLMLPAKSYSYSLEDISTYRQKMIEYAIKRVHDADEDPVETQAVIATLRSQQSILQRPKRNATYKILQKCFNLEEK LLQEMVDNGEISVKQQTFYERMSLFQSFQLHQSFIQHFMYRARFYFIKLSHRFKRRIKRVDPLVVTKKFNNARDELAQVE NEISPQIFAYLKEHLNADNRAEIHWIEEYYRERHRRFQNNTRANEIQEELFINAFQNEYNFIQEQLGKKNISRELASLLY EQVSNDEWVYMQNDSIYA >Mature_657_residues SIVFFVLILIIATVFSNALDTKIKFLPRAIIQIMMGLALSFIPNFNHFNLNPEVFMLAIIAPLMFYDGMNTNIVKLKRTL SNTFSLAIGLAVVTIILVGYLGYALLPHIPIALAFALAAIITPTDAVAVSSVTENLDLPNEAMLSLKNESLFNDASGIVM FDLALTAFHTGHFSPVLSIFNYLYVFFGGLIVGWIVGWLFVRLQLLLIETDIDNPNIIVPINFIKPFAIYLLAEMFDTSG ILAVVAAGLIQSTQAQSLRLTSTKTQMVSKTTYEIFTNLMNGFVFILLGVSFPTVIYDITNEGRQVSSLGYLILVGIILY IVMIIIRYLWVTLKLANIRIRPADKVLNHFLIAINGIHGTITLSMAFSIPIVLHGKIFPFRNDIIFIAATVIILSLLVPS IILPLMLPAKSYSYSLEDISTYRQKMIEYAIKRVHDADEDPVETQAVIATLRSQQSILQRPKRNATYKILQKCFNLEEKL LQEMVDNGEISVKQQTFYERMSLFQSFQLHQSFIQHFMYRARFYFIKLSHRFKRRIKRVDPLVVTKKFNNARDELAQVEN EISPQIFAYLKEHLNADNRAEIHWIEEYYRERHRRFQNNTRANEIQEELFINAFQNEYNFIQEQLGKKNISRELASLLYE QVSNDEWVYMQNDSIYA
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790501, Length=457, Percent_Identity=32.6039387308534, Blast_Score=201, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71992107, Length=328, Percent_Identity=23.4756097560976, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25147678, Length=312, Percent_Identity=25, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992101, Length=328, Percent_Identity=23.4756097560976, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71980847, Length=379, Percent_Identity=22.6912928759894, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 - InterPro: IPR002014 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 75348; Mature: 75216
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVFFVLILIIATVFSNALDTKIKFLPRAIIQIMMGLALSFIPNFNHFNLNPEVFMLAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH IAPLMFYDGMNTNIVKLKRTLSNTFSLAIGLAVVTIILVGYLGYALLPHIPIALAFALAA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IITPTDAVAVSSVTENLDLPNEAMLSLKNESLFNDASGIVMFDLALTAFHTGHFSPVLSI HHCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH FNYLYVFFGGLIVGWIVGWLFVRLQLLLIETDIDNPNIIVPINFIKPFAIYLLAEMFDTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECHHHHHHHHHHHHHHCCC GILAVVAAGLIQSTQAQSLRLTSTKTQMVSKTTYEIFTNLMNGFVFILLGVSFPTVIYDI CHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEC TNEGRQVSSLGYLILVGIILYIVMIIIRYLWVTLKLANIRIRPADKVLNHFLIAINGIHG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHEECCCE TITLSMAFSIPIVLHGKIFPFRNDIIFIAATVIILSLLVPSIILPLMLPAKSYSYSLEDI EEEEEEEECCCEEEECEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH STYRQKMIEYAIKRVHDADEDPVETQAVIATLRSQQSILQRPKRNATYKILQKCFNLEEK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHH LLQEMVDNGEISVKQQTFYERMSLFQSFQLHQSFIQHFMYRARFYFIKLSHRFKRRIKRV HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPLVVTKKFNNARDELAQVENEISPQIFAYLKEHLNADNRAEIHWIEEYYRERHRRFQNN CCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC TRANEIQEELFINAFQNEYNFIQEQLGKKNISRELASLLYEQVSNDEWVYMQNDSIYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure SIVFFVLILIIATVFSNALDTKIKFLPRAIIQIMMGLALSFIPNFNHFNLNPEVFMLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH IAPLMFYDGMNTNIVKLKRTLSNTFSLAIGLAVVTIILVGYLGYALLPHIPIALAFALAA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IITPTDAVAVSSVTENLDLPNEAMLSLKNESLFNDASGIVMFDLALTAFHTGHFSPVLSI HHCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH FNYLYVFFGGLIVGWIVGWLFVRLQLLLIETDIDNPNIIVPINFIKPFAIYLLAEMFDTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECHHHHHHHHHHHHHHCCC GILAVVAAGLIQSTQAQSLRLTSTKTQMVSKTTYEIFTNLMNGFVFILLGVSFPTVIYDI CHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEC TNEGRQVSSLGYLILVGIILYIVMIIIRYLWVTLKLANIRIRPADKVLNHFLIAINGIHG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHEECCCE TITLSMAFSIPIVLHGKIFPFRNDIIFIAATVIILSLLVPSIILPLMLPAKSYSYSLEDI EEEEEEEECCCEEEECEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH STYRQKMIEYAIKRVHDADEDPVETQAVIATLRSQQSILQRPKRNATYKILQKCFNLEEK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHH LLQEMVDNGEISVKQQTFYERMSLFQSFQLHQSFIQHFMYRARFYFIKLSHRFKRRIKRV HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPLVVTKKFNNARDELAQVENEISPQIFAYLKEHLNADNRAEIHWIEEYYRERHRRFQNN CCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC TRANEIQEELFINAFQNEYNFIQEQLGKKNISRELASLLYEQVSNDEWVYMQNDSIYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA