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The map label for this gene is dedA [H]

Identifier: 116492163

GI number: 116492163

Start: 405479

End: 406120

Strand: Reverse

Name: dedA [H]

Synonym: PEPE_0360

Alternate gene names: 116492163

Gene position: 406120-405479 (Counterclockwise)

Preceding gene: 116492164

Following gene: 116492159

Centisome position: 22.16

GC content: 33.64

Gene sequence:

>642_bases
ATGTTTGATCTCATACTCGGATTTGTGATTCATCCTTTAACATATATAACACCTTTAACCGAACACCTTCATAACTGGGT
CTACCTGATTTTATTTATCTGGATTTTTCTGGAAACAGCTTTTATCGTATTTTCATTTTTACCAGGTCAATCGGTACTTT
TCCTAACTGGAACTATTGCTTCCGCAGCTAATTCACGGCTTAACATTTTTATCCTAACGATTACTTTTATCATTGCAGCT
ACTAGCGGTGCCATCGTTAAATACCGTTATGGAGTGAATATTAAATCTAAAAACAAAATTGCTAAACGCATTAGTGATTC
CGAAAAAATGAACCAAACTCAGGAAGTTTTCGATGAAAACGCTAAAAAATCACTAATATTTTCTCGTTTTATTCCCTTTG
TCGGTCTTTTTATTCCAATTGTAGCCGGGACCACCCAAATGGATTGGCATCAATTTAATAAATTAAATTTCATCGGTGTC
TTATTATGGGTTGGAATTTGTTGTTTTTCGGGTTATTTCTTTGGCCAAACCCCCTTTATCAAGCAGTATTTTACTTTGAT
ATTCTTACTATTAATTATTATTCCTGCTATTTTCCAAATTATTTGGCGCAAATTAAAAAACCGCCCAGAGGAAAAAGCTT
AA

Upstream 100 bases:

>100_bases
ATGAAATCTATTAACATACAACACCGATTAGGCGCTGTAATTGCAATCTAGCAAATAAGCCTTTATCATTAATAAAGAAA
AAAGAAAGCGAGGCGGATAA

Downstream 100 bases:

>100_bases
AAACTCTAGCAAAGTTAGCTACCAAAATCTAACTTTGCTAGAGTTTTTATTTAATCATATAAAAAAAGATTTAGTTTCGA
TTAGACCTCAAAATTAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MFDLILGFVIHPLTYITPLTEHLHNWVYLILFIWIFLETAFIVFSFLPGQSVLFLTGTIASAANSRLNIFILTITFIIAA
TSGAIVKYRYGVNIKSKNKIAKRISDSEKMNQTQEVFDENAKKSLIFSRFIPFVGLFIPIVAGTTQMDWHQFNKLNFIGV
LLWVGICCFSGYFFGQTPFIKQYFTLIFLLLIIIPAIFQIIWRKLKNRPEEKA

Sequences:

>Translated_213_residues
MFDLILGFVIHPLTYITPLTEHLHNWVYLILFIWIFLETAFIVFSFLPGQSVLFLTGTIASAANSRLNIFILTITFIIAA
TSGAIVKYRYGVNIKSKNKIAKRISDSEKMNQTQEVFDENAKKSLIFSRFIPFVGLFIPIVAGTTQMDWHQFNKLNFIGV
LLWVGICCFSGYFFGQTPFIKQYFTLIFLLLIIIPAIFQIIWRKLKNRPEEKA
>Mature_213_residues
MFDLILGFVIHPLTYITPLTEHLHNWVYLILFIWIFLETAFIVFSFLPGQSVLFLTGTIASAANSRLNIFILTITFIIAA
TSGAIVKYRYGVNIKSKNKIAKRISDSEKMNQTQEVFDENAKKSLIFSRFIPFVGLFIPIVAGTTQMDWHQFNKLNFIGV
LLWVGICCFSGYFFGQTPFIKQYFTLIFLLLIIIPAIFQIIWRKLKNRPEEKA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=202, Percent_Identity=33.1683168316832, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1789481, Length=159, Percent_Identity=29.559748427673, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789384, Length=177, Percent_Identity=27.683615819209, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24575; Mature: 24575

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLILGFVIHPLTYITPLTEHLHNWVYLILFIWIFLETAFIVFSFLPGQSVLFLTGTIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
SAANSRLNIFILTITFIIAATSGAIVKYRYGVNIKSKNKIAKRISDSEKMNQTQEVFDEN
HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCC
AKKSLIFSRFIPFVGLFIPIVAGTTQMDWHQFNKLNFIGVLLWVGICCFSGYFFGQTPFI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KQYFTLIFLLLIIIPAIFQIIWRKLKNRPEEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDLILGFVIHPLTYITPLTEHLHNWVYLILFIWIFLETAFIVFSFLPGQSVLFLTGTIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
SAANSRLNIFILTITFIIAATSGAIVKYRYGVNIKSKNKIAKRISDSEKMNQTQEVFDEN
HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCC
AKKSLIFSRFIPFVGLFIPIVAGTTQMDWHQFNKLNFIGVLLWVGICCFSGYFFGQTPFI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KQYFTLIFLLLIIIPAIFQIIWRKLKNRPEEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]