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The map label for this gene is uspF [C]

Identifier: 116492158

GI number: 116492158

Start: 402320

End: 402772

Strand: Reverse

Name: uspF [C]

Synonym: PEPE_0355

Alternate gene names: 116492158

Gene position: 402772-402320 (Counterclockwise)

Preceding gene: 116492159

Following gene: 116492157

Centisome position: 21.98

GC content: 36.87

Gene sequence:

>453_bases
ATGCTACAACAATACAAAAATATCTTAGCACCTGTTGATGGGTCTAAAACAACTGATGTTGTTCTAGATCGCGCAATTGA
AGTTGCAAAAAGAAATGACACTCATCTCGATATTTTAAATGTCCTTGAAGTAAACCAATTTAGTGATACTTATGGTGGGG
CAGTTAGTGGAGATGTAATCTATAAACTTTCAGAGGACGTCCAACATCGATTAGAAGAACTCAAGAAAAAAGCTGAGGAC
GCTGGAGTTAAAGATGTTAGTGTTCACATTCGTTTTGGGAATCCAAAACCAGTTATTGCACGCGAATTTCCAGCTGACCA
TAAAAACGAATTGATTATGATTGGTTCAACAGGACTTAATGCTTTGGAACGTTTAATGGTTGGTTCTGTTGCAACTTACG
TTAGCCGTAACGCGATTTGCGATGTATTGATTGTTAAACCAGAAAAGAAATAA

Upstream 100 bases:

>100_bases
ATATTTTAGTTTATCCGGTAAATTCGATGTAAAAAGGCTTACATTTTTTTGTGAAAATGATATCATTAGTATAAGAAAAG
ATGATTGGATGGTGGGTAAC

Downstream 100 bases:

>100_bases
TTATCATTAATACCATATACTTAAAGGATCGATTGAACATTTTGTTGAGTCGATTCTTTTATTTCGTTAAGGAGTTTCAT
TATGCAATGGCACTATGCTA

Product: universal stress protein UspA-like nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLQQYKNILAPVDGSKTTDVVLDRAIEVAKRNDTHLDILNVLEVNQFSDTYGGAVSGDVIYKLSEDVQHRLEELKKKAED
AGVKDVSVHIRFGNPKPVIAREFPADHKNELIMIGSTGLNALERLMVGSVATYVSRNAICDVLIVKPEKK

Sequences:

>Translated_150_residues
MLQQYKNILAPVDGSKTTDVVLDRAIEVAKRNDTHLDILNVLEVNQFSDTYGGAVSGDVIYKLSEDVQHRLEELKKKAED
AGVKDVSVHIRFGNPKPVIAREFPADHKNELIMIGSTGLNALERLMVGSVATYVSRNAICDVLIVKPEKK
>Mature_150_residues
MLQQYKNILAPVDGSKTTDVVLDRAIEVAKRNDTHLDILNVLEVNQFSDTYGGAVSGDVIYKLSEDVQHRLEELKKKAED
AGVKDVSVHIRFGNPKPVIAREFPADHKNELIMIGSTGLNALERLMVGSVATYVSRNAICDVLIVKPEKK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16599; Mature: 16599

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQQYKNILAPVDGSKTTDVVLDRAIEVAKRNDTHLDILNVLEVNQFSDTYGGAVSGDVI
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHH
YKLSEDVQHRLEELKKKAEDAGVKDVSVHIRFGNPKPVIAREFPADHKNELIMIGSTGLN
EEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCCCCEEEEECCCHH
ALERLMVGSVATYVSRNAICDVLIVKPEKK
HHHHHHHHHHHHHHHHCCCEEEEEECCCCC
>Mature Secondary Structure
MLQQYKNILAPVDGSKTTDVVLDRAIEVAKRNDTHLDILNVLEVNQFSDTYGGAVSGDVI
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHH
YKLSEDVQHRLEELKKKAEDAGVKDVSVHIRFGNPKPVIAREFPADHKNELIMIGSTGLN
EEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCCCCEEEEECCCHH
ALERLMVGSVATYVSRNAICDVLIVKPEKK
HHHHHHHHHHHHHHHHCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]