Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492037

Identifier: 116492037

GI number: 116492037

Start: 269091

End: 270134

Strand: Reverse

Name: 116492037

Synonym: PEPE_0229

Alternate gene names: NA

Gene position: 270134-269091 (Counterclockwise)

Preceding gene: 116492052

Following gene: 116492036

Centisome position: 14.74

GC content: 37.07

Gene sequence:

>1044_bases
ATGACAAAATTAATTAATTTTTTAGCCGAGTATCAGCGCGAAATCGAAAGTCAGCCCATCGAATTAGACTTAGCTTTATT
TAGCCGTTTGGTCGGACTCCCCTTTGAAGCCGTACTAACTCAGCCTTCAGCCCCTTTAGTGGAAGCTTGCATGAAATTAA
TTGAATTTGTAGATAATGAAAATTACTTGATTTTACCTGCTGATCGCCAAATGTTAGAACAAATTGCTTTTAGCAATCGA
TATCAAAGTGTTCAAATATGCGATGTGGTCCAAGGACCACACCGCTTTTTAGCGGCTACTTTTGTTCTTTCAAAAACCAC
TAAAGTCATTGCTTTTAGAGGCCCTAACGGAACCTTATTAAGTTGGAAAGCTGACCTCCATTTTTCATTTTCTTCCATAA
ATAAGTTAAAAATCCAAGCACACCAATATCTCCTCCAAGCCCTACAGCACGATAATCAAAACATCTATTGCGTTGGCTTT
TCTCAAGGAGCTTCCATTGCTGCTCTAGCTTGCATGGATATTTCTGATACCCATCGTCATCGAATTCAAACCATTATCTT
TGACAGTCCCGGATTACCTGATGACCATTATCAAAGTCCAATTCCTATTATTGAATTAGTTCCACCGCTGTCGTTATTCG
CACTAGTTGGAGAACACCCTTTTCACCAAATTACCATTAGCAGCTCTTCAACAGGGATTTGGCAGCACGATCTTTATTCT
TGGGAGGCAGATTCACATGGAGAATTTGCTAAAAACATTGGAATTACCAATCCCACGACTATTCAACACCAATTTATTCA
ATTATTACCAAGCAATATTACTGACGAAAATATTGACCGTACCTTGAATGTTGCTATCAGTATTTTTAGCCAATTAAATT
TCCATTCCACTTCCGAACTTATTAAACATTGGAATCAGTTTAATGCTCTAATTCAAACTGAAATCACGGCCGAAAATATT
GTAGTTAAAACTGCTATTCTTCGTCTCCAAAAATTGATTTTTAAAAATGCCGCTTTGAATCTCCAATCAATTCCATTAAA
TTAA

Upstream 100 bases:

>100_bases
TCAGCTATATTCTGTTTTTTACTTGTAACCGAGTTTGACGAGTGAACCAGCACCGTGATACTCTTTTTCATAACCTATAC
TAAGGACAGTGAATAGCACG

Downstream 100 bases:

>100_bases
GTTTCTTAAATTATGGTATCCTTGAATCAACCATTTATGAGGAGTGTGAATTTAATGTCAAATGAATTTCCACAAGCTTT
AACTATCGCTGGTTCTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTKLINFLAEYQREIESQPIELDLALFSRLVGLPFEAVLTQPSAPLVEACMKLIEFVDNENYLILPADRQMLEQIAFSNR
YQSVQICDVVQGPHRFLAATFVLSKTTKVIAFRGPNGTLLSWKADLHFSFSSINKLKIQAHQYLLQALQHDNQNIYCVGF
SQGASIAALACMDISDTHRHRIQTIIFDSPGLPDDHYQSPIPIIELVPPLSLFALVGEHPFHQITISSSSTGIWQHDLYS
WEADSHGEFAKNIGITNPTTIQHQFIQLLPSNITDENIDRTLNVAISIFSQLNFHSTSELIKHWNQFNALIQTEITAENI
VVKTAILRLQKLIFKNAALNLQSIPLN

Sequences:

>Translated_347_residues
MTKLINFLAEYQREIESQPIELDLALFSRLVGLPFEAVLTQPSAPLVEACMKLIEFVDNENYLILPADRQMLEQIAFSNR
YQSVQICDVVQGPHRFLAATFVLSKTTKVIAFRGPNGTLLSWKADLHFSFSSINKLKIQAHQYLLQALQHDNQNIYCVGF
SQGASIAALACMDISDTHRHRIQTIIFDSPGLPDDHYQSPIPIIELVPPLSLFALVGEHPFHQITISSSSTGIWQHDLYS
WEADSHGEFAKNIGITNPTTIQHQFIQLLPSNITDENIDRTLNVAISIFSQLNFHSTSELIKHWNQFNALIQTEITAENI
VVKTAILRLQKLIFKNAALNLQSIPLN
>Mature_346_residues
TKLINFLAEYQREIESQPIELDLALFSRLVGLPFEAVLTQPSAPLVEACMKLIEFVDNENYLILPADRQMLEQIAFSNRY
QSVQICDVVQGPHRFLAATFVLSKTTKVIAFRGPNGTLLSWKADLHFSFSSINKLKIQAHQYLLQALQHDNQNIYCVGFS
QGASIAALACMDISDTHRHRIQTIIFDSPGLPDDHYQSPIPIIELVPPLSLFALVGEHPFHQITISSSSTGIWQHDLYSW
EADSHGEFAKNIGITNPTTIQHQFIQLLPSNITDENIDRTLNVAISIFSQLNFHSTSELIKHWNQFNALIQTEITAENIV
VKTAILRLQKLIFKNAALNLQSIPLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39140; Mature: 39009

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLINFLAEYQREIESQPIELDLALFSRLVGLPFEAVLTQPSAPLVEACMKLIEFVDNE
CHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCC
NYLILPADRQMLEQIAFSNRYQSVQICDVVQGPHRFLAATFVLSKTTKVIAFRGPNGTLL
CEEEEECCHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCEE
SWKADLHFSFSSINKLKIQAHQYLLQALQHDNQNIYCVGFSQGASIAALACMDISDTHRH
EEEECEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCHHHHH
RIQTIIFDSPGLPDDHYQSPIPIIELVPPLSLFALVGEHPFHQITISSSSTGIWQHDLYS
EEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCEEEEEECCCCCCEECCCCC
WEADSHGEFAKNIGITNPTTIQHQFIQLLPSNITDENIDRTLNVAISIFSQLNFHSTSEL
CCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
IKHWNQFNALIQTEITAENIVVKTAILRLQKLIFKNAALNLQSIPLN
HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
>Mature Secondary Structure 
TKLINFLAEYQREIESQPIELDLALFSRLVGLPFEAVLTQPSAPLVEACMKLIEFVDNE
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCC
NYLILPADRQMLEQIAFSNRYQSVQICDVVQGPHRFLAATFVLSKTTKVIAFRGPNGTLL
CEEEEECCHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCEE
SWKADLHFSFSSINKLKIQAHQYLLQALQHDNQNIYCVGFSQGASIAALACMDISDTHRH
EEEECEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCHHHHH
RIQTIIFDSPGLPDDHYQSPIPIIELVPPLSLFALVGEHPFHQITISSSSTGIWQHDLYS
EEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCEEEEEECCCCCCEECCCCC
WEADSHGEFAKNIGITNPTTIQHQFIQLLPSNITDENIDRTLNVAISIFSQLNFHSTSEL
CCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
IKHWNQFNALIQTEITAENIVVKTAILRLQKLIFKNAALNLQSIPLN
HHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA