Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492027

Identifier: 116492027

GI number: 116492027

Start: 259285

End: 259656

Strand: Reverse

Name: 116492027

Synonym: PEPE_0219

Alternate gene names: NA

Gene position: 259656-259285 (Counterclockwise)

Preceding gene: 116492028

Following gene: 116492026

Centisome position: 14.17

GC content: 36.02

Gene sequence:

>372_bases
ATGCGAAAAGGAATGATTATCAGTGGCGTGGTCGTCGTAATTCTTTTAATTACTTTTGGAAGCGCCTATTTCTGGTATAA
CTCTAACTATGGTACTCAGGATTACTACACTCAAATCGTCGATAAAGGCACTAAATTTGTGGAAAAAGATGATTCCAATC
GTAGTTATGTGAATTATGCTTACCACCAACCTGCTTATAACCAAGCTAGTCAAAAGATAACGGTTAAATTTAACGGAAAC
CTAGAACGTCCATTAAAGCTCCACGCATATTTGAAAATTGGCTACAATGCGAAACGAAATCAAGTTATTTCTTGGAGTAA
AGTTGATAAAAAAGACGTTCCCAAGGCAGCCTTGAAACAAATTAATCCTTAA

Upstream 100 bases:

>100_bases
TTGCACTATTAGTTATCTATAAAAAATTAACTGCTTTAATTTTACTAGGTTGGATAGCCTTGGGAATTTTATTAATCTCT
AAAAACTAGGAGGTTTACTT

Downstream 100 bases:

>100_bases
TTTCTTCAAAGCACTTTAACGTTAGCTTTTTTCAAAAATGTGCCTTAAAATATGGGTAGAGGTGATGGATAATGACACGA
AAAATTGGAATCATTGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYAYHQPAYNQASQKITVKFNGN
LERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQINP

Sequences:

>Translated_123_residues
MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYAYHQPAYNQASQKITVKFNGN
LERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQINP
>Mature_123_residues
MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYAYHQPAYNQASQKITVKFNGN
LERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQINP

Specific function: Unknown

COG id: COG5294

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14176; Mature: 14176

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYA
CCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEE
YHQPAYNQASQKITVKFNGNLERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQ
ECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHC
INP
CCC
>Mature Secondary Structure
MRKGMIISGVVVVILLITFGSAYFWYNSNYGTQDYYTQIVDKGTKFVEKDDSNRSYVNYA
CCCCEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCEEEEE
YHQPAYNQASQKITVKFNGNLERPLKLHAYLKIGYNAKRNQVISWSKVDKKDVPKAALKQ
ECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHC
INP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA