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The map label for this gene is xylP [H]

Identifier: 116491996

GI number: 116491996

Start: 218212

End: 219597

Strand: Direct

Name: xylP [H]

Synonym: PEPE_0185

Alternate gene names: 116491996

Gene position: 218212-219597 (Clockwise)

Preceding gene: 116491994

Following gene: 116491997

Centisome position: 11.91

GC content: 35.71

Gene sequence:

>1386_bases
ATGGAAATACCACAAAAAGAACCAGTACATACACATAATTTAGTTTCATGGAAAGAACGCATTAGTTATGCTGTGAGTGA
TTTTGCATGTAACTTGTCATTCCAAATGATTGGAACATACTTAATGTTCTTCTATACAGATGTTTTCGGGATTACAGCAG
CTGCAGTAGGAACGTTATTCTTGGTGGCTCGTATTGTGGATGCTATTGATGGTCCAGTTTGGGGATTATTAATTGATCAT
ACCCATACAAGATGGGGTAAGAGTCGTCCATTCTTCCTATGGTTTGCTATCCCATTCGCAATTTTCTGTGTATTGTGTTT
CACAACACCTAATCTAAGCATGGGTGGAAAGGTTGTTTGGGCATACATCACATATATTGGAGTAGATGTTTTGTATTCAG
CTGTAAATATTCCAATTACTTCAATTTTGCCTAGTTTAACAAATGATACTGATGAACGTGTAACTCTAAGTACAATTCGT
CAATTCTTTGGTACAGCAGGCGCAACCATTGTTACAGTTGCAGCATTACCAATGGTTAACTTTTTTGGTGGTGGCAATCA
ACAAAAAGGTTTCTTTATTAGTGTATTAATTTTGGCTATTATCTCTGCAATTTTATTGTTAATAACTTTTGCTAATACAA
GAGAACGTATTCAAACTAAGAGTTCAAGAAAATCCATTCCAGTTAAACAATCTTTGAAAGCGCTTAAGAAAAATTGGCCT
TGGGCAATTATCATTTTTATCAATTTCATTTACTGGCTTGGAATGCAAACCAAGAGTCAAGTTACTGTTTATTTCTTCAA
ATACAACATGCATAACGCCGGATTAGCTTCATTGGTATTAGGTTTACAAATTGTGGCATTGTTGGCAGTTGTTATTACAC
CAGCGGTAGCTAAAAAAATTGGTAAGAGAAATACCATGTTAATGGGAATGTTCTTAGCAATTGTTGGTCAATTAATTTTG
AGTATAGGTGCAAGTCAATTAAATGTAGCAATCATTATTGTTGCAACCTTGGTTGGATATCTAGGAACAGGTTTTGTTTC
AGGATTAATCGCTGTTATGTTAGCTGATTCAGTGGATTATGGTGAATGGAAGAATGGGGTTCGTGCTGAAGGTATCGTTA
CTTCATTCTCTAGCTTCTCTGCTAAACTTGGAATGGGTATTGGTGGTGCAGTAACTGGTATGATTTTGAGTGCAGGTGGT
TATGTAGCTAATGCTACACAAACAGCAACAGCCTTAAGAGCTATTGAACAAAATTACATTTGGGTTCCAATTATTGGTTT
TGGACTATCAGCAATTGCTTTGTTATTCTACAAGGTAGATGGTGTTGAAGACAAGATGCAAGCAGATCTTGCAGCAAAAC
ATCAAAAAGAAAATGAAGAAGAATAA

Upstream 100 bases:

>100_bases
CGCTTTACAAAAATATCTAAGTATGTATAATGTTGTTTGTAAATAGAACTAACAAACCTTTTGTATCATAATAAAAAATT
AGGAAAAGGGTGCTAATATT

Downstream 100 bases:

>100_bases
TATAAGTAATTAGGGAGAGCAACATGGTAATTCATAAAGAAACGATGCGATCAGCAAACGAAAAATCAGTTTTACAGAGA
ATTTTTACCGAAGGTCCGAT

Product: Na+/xyloside symporter related transporter

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MEIPQKEPVHTHNLVSWKERISYAVSDFACNLSFQMIGTYLMFFYTDVFGITAAAVGTLFLVARIVDAIDGPVWGLLIDH
THTRWGKSRPFFLWFAIPFAIFCVLCFTTPNLSMGGKVVWAYITYIGVDVLYSAVNIPITSILPSLTNDTDERVTLSTIR
QFFGTAGATIVTVAALPMVNFFGGGNQQKGFFISVLILAIISAILLLITFANTRERIQTKSSRKSIPVKQSLKALKKNWP
WAIIIFINFIYWLGMQTKSQVTVYFFKYNMHNAGLASLVLGLQIVALLAVVITPAVAKKIGKRNTMLMGMFLAIVGQLIL
SIGASQLNVAIIIVATLVGYLGTGFVSGLIAVMLADSVDYGEWKNGVRAEGIVTSFSSFSAKLGMGIGGAVTGMILSAGG
YVANATQTATALRAIEQNYIWVPIIGFGLSAIALLFYKVDGVEDKMQADLAAKHQKENEEE

Sequences:

>Translated_461_residues
MEIPQKEPVHTHNLVSWKERISYAVSDFACNLSFQMIGTYLMFFYTDVFGITAAAVGTLFLVARIVDAIDGPVWGLLIDH
THTRWGKSRPFFLWFAIPFAIFCVLCFTTPNLSMGGKVVWAYITYIGVDVLYSAVNIPITSILPSLTNDTDERVTLSTIR
QFFGTAGATIVTVAALPMVNFFGGGNQQKGFFISVLILAIISAILLLITFANTRERIQTKSSRKSIPVKQSLKALKKNWP
WAIIIFINFIYWLGMQTKSQVTVYFFKYNMHNAGLASLVLGLQIVALLAVVITPAVAKKIGKRNTMLMGMFLAIVGQLIL
SIGASQLNVAIIIVATLVGYLGTGFVSGLIAVMLADSVDYGEWKNGVRAEGIVTSFSSFSAKLGMGIGGAVTGMILSAGG
YVANATQTATALRAIEQNYIWVPIIGFGLSAIALLFYKVDGVEDKMQADLAAKHQKENEEE
>Mature_461_residues
MEIPQKEPVHTHNLVSWKERISYAVSDFACNLSFQMIGTYLMFFYTDVFGITAAAVGTLFLVARIVDAIDGPVWGLLIDH
THTRWGKSRPFFLWFAIPFAIFCVLCFTTPNLSMGGKVVWAYITYIGVDVLYSAVNIPITSILPSLTNDTDERVTLSTIR
QFFGTAGATIVTVAALPMVNFFGGGNQQKGFFISVLILAIISAILLLITFANTRERIQTKSSRKSIPVKQSLKALKKNWP
WAIIIFINFIYWLGMQTKSQVTVYFFKYNMHNAGLASLVLGLQIVALLAVVITPAVAKKIGKRNTMLMGMFLAIVGQLIL
SIGASQLNVAIIIVATLVGYLGTGFVSGLIAVMLADSVDYGEWKNGVRAEGIVTSFSSFSAKLGMGIGGAVTGMILSAGG
YVANATQTATALRAIEQNYIWVPIIGFGLSAIALLFYKVDGVEDKMQADLAAKHQKENEEE

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=450, Percent_Identity=33.1111111111111, Blast_Score=232, Evalue=3e-62,
Organism=Escherichia coli, GI87082306, Length=456, Percent_Identity=33.1140350877193, Blast_Score=232, Evalue=3e-62,
Organism=Escherichia coli, GI1787902, Length=452, Percent_Identity=32.7433628318584, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1790561, Length=450, Percent_Identity=29.3333333333333, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI48994989, Length=458, Percent_Identity=27.9475982532751, Blast_Score=178, Evalue=8e-46,
Organism=Escherichia coli, GI145693206, Length=424, Percent_Identity=26.6509433962264, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50281; Mature: 50281

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIPQKEPVHTHNLVSWKERISYAVSDFACNLSFQMIGTYLMFFYTDVFGITAAAVGTLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVARIVDAIDGPVWGLLIDHTHTRWGKSRPFFLWFAIPFAIFCVLCFTTPNLSMGGKVVW
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHH
AYITYIGVDVLYSAVNIPITSILPSLTNDTDERVTLSTIRQFFGTAGATIVTVAALPMVN
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHH
FFGGGNQQKGFFISVLILAIISAILLLITFANTRERIQTKSSRKSIPVKQSLKALKKNWP
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
WAIIIFINFIYWLGMQTKSQVTVYFFKYNMHNAGLASLVLGLQIVALLAVVITPAVAKKI
EEEHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKRNTMLMGMFLAIVGQLILSIGASQLNVAIIIVATLVGYLGTGFVSGLIAVMLADSVDY
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GEWKNGVRAEGIVTSFSSFSAKLGMGIGGAVTGMILSAGGYVANATQTATALRAIEQNYI
CHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCE
WVPIIGFGLSAIALLFYKVDGVEDKMQADLAAKHQKENEEE
EEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEIPQKEPVHTHNLVSWKERISYAVSDFACNLSFQMIGTYLMFFYTDVFGITAAAVGTLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVARIVDAIDGPVWGLLIDHTHTRWGKSRPFFLWFAIPFAIFCVLCFTTPNLSMGGKVVW
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHH
AYITYIGVDVLYSAVNIPITSILPSLTNDTDERVTLSTIRQFFGTAGATIVTVAALPMVN
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHH
FFGGGNQQKGFFISVLILAIISAILLLITFANTRERIQTKSSRKSIPVKQSLKALKKNWP
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
WAIIIFINFIYWLGMQTKSQVTVYFFKYNMHNAGLASLVLGLQIVALLAVVITPAVAKKI
EEEHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKRNTMLMGMFLAIVGQLILSIGASQLNVAIIIVATLVGYLGTGFVSGLIAVMLADSVDY
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GEWKNGVRAEGIVTSFSSFSAKLGMGIGGAVTGMILSAGGYVANATQTATALRAIEQNYI
CHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCE
WVPIIGFGLSAIALLFYKVDGVEDKMQADLAAKHQKENEEE
EEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]