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The map label for this gene is agaC [H]

Identifier: 116491991

GI number: 116491991

Start: 209176

End: 210015

Strand: Direct

Name: agaC [H]

Synonym: PEPE_0178

Alternate gene names: 116491991

Gene position: 209176-210015 (Clockwise)

Preceding gene: 116491990

Following gene: 116491992

Centisome position: 11.42

GC content: 36.55

Gene sequence:

>840_bases
ATGAATCAATATGTTACTGCCATATTATTAGCTTTAATAGCAATGTTAGGTAACGGGGAGTATTTTTTAGGATCGTCTAT
GCTTTCTAGACCATTGGTAATGTGTACATTAGCTGGATTGATTACAGGAAATATTCATGAAGGAATTATAATGGGGGCAA
CTTTAGAGTTGGCTTTCGTGGGATCTTTTTCGATCGGAGCTTCGATACCACCAGAGATTATTTCAGGAAGTGTCCTAGGG
ACGGCGTTTGCAATTGCAGCAGGTAAGAGTACAGCGGTTGCTTTAACACTAGGTATTCCAATTGCTTCACTAGTATTAGT
TATTAAGAACCTTTGTTTTATTTTTATCCTACCTTATTTTGTACATAAAGCAGATGCGTATGCTGCCGAAGGTGATGGAC
GAGGTTTGAGTAGAATGAATGTTTTAGGTGGCTTTTTTTCAGTGAACTTACCAATCGGTTTGGTGGTAGGAATTTCATAT
CTTTTAGGAAGCCCAGTAATTAAATCTTTCCTTGCAATTATACCTAAATTTATTATTAATGGTCTTGGAATTGCTACGGG
ACTATTGCCAGCTTATGGTTTTGCTCTTTTATTGAAGATGATGATCAATAAAAACAATGTGACATTCTTTATTTTAGGTT
TTGCCTTGGCGGTTTATGCAAATATTCCAGTAACAGGGGTGGCTATTTTTGGAGCTTGTTTAGCGTTAGTATTAACAGGT
TATTCATCATACAAAGATAAATTTAGTACAAAGACAACACAAGTTGCTGCAGATGGAGGATCTTTGCCAGACGGTACAGG
GAATAACGGAGGTATAAATTATGAAGATGAAGAGTTCTAA

Upstream 100 bases:

>100_bases
ATAGCAGAATTGCAACAGCAAAATGTTGATGTATATATACAACAGGTACCGAATGAAGACAAACAAGAATTTCATAAAAA
ATAAATAAGGAGGTTGTATT

Downstream 100 bases:

>100_bases
ATTACTTACTAGAAAAGATTTAATGTCAACATTTTGGCGTTCATTTACTATGGAGTGGGCATGGAACTATGAAAGACAAT
CAAATTTAGGGTATAGCTAT

Product: mannose-specific PTS system component IIC

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNQYVTAILLALIAMLGNGEYFLGSSMLSRPLVMCTLAGLITGNIHEGIIMGATLELAFVGSFSIGASIPPEIISGSVLG
TAFAIAAGKSTAVALTLGIPIASLVLVIKNLCFIFILPYFVHKADAYAAEGDGRGLSRMNVLGGFFSVNLPIGLVVGISY
LLGSPVIKSFLAIIPKFIINGLGIATGLLPAYGFALLLKMMINKNNVTFFILGFALAVYANIPVTGVAIFGACLALVLTG
YSSYKDKFSTKTTQVAADGGSLPDGTGNNGGINYEDEEF

Sequences:

>Translated_279_residues
MNQYVTAILLALIAMLGNGEYFLGSSMLSRPLVMCTLAGLITGNIHEGIIMGATLELAFVGSFSIGASIPPEIISGSVLG
TAFAIAAGKSTAVALTLGIPIASLVLVIKNLCFIFILPYFVHKADAYAAEGDGRGLSRMNVLGGFFSVNLPIGLVVGISY
LLGSPVIKSFLAIIPKFIINGLGIATGLLPAYGFALLLKMMINKNNVTFFILGFALAVYANIPVTGVAIFGACLALVLTG
YSSYKDKFSTKTTQVAADGGSLPDGTGNNGGINYEDEEF
>Mature_279_residues
MNQYVTAILLALIAMLGNGEYFLGSSMLSRPLVMCTLAGLITGNIHEGIIMGATLELAFVGSFSIGASIPPEIISGSVLG
TAFAIAAGKSTAVALTLGIPIASLVLVIKNLCFIFILPYFVHKADAYAAEGDGRGLSRMNVLGGFFSVNLPIGLVVGISY
LLGSPVIKSFLAIIPKFIINGLGIATGLLPAYGFALLLKMMINKNNVTFFILGFALAVYANIPVTGVAIFGACLALVLTG
YSSYKDKFSTKTTQVAADGGSLPDGTGNNGGINYEDEEF

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=272, Percent_Identity=30.1470588235294, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788121, Length=263, Percent_Identity=28.8973384030418, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 28981; Mature: 28981

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQYVTAILLALIAMLGNGEYFLGSSMLSRPLVMCTLAGLITGNIHEGIIMGATLELAFV
CCHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEE
GSFSIGASIPPEIISGSVLGTAFAIAAGKSTAVALTLGIPIASLVLVIKNLCFIFILPYF
ECCCCCCCCCHHHHCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VHKADAYAAEGDGRGLSRMNVLGGFFSVNLPIGLVVGISYLLGSPVIKSFLAIIPKFIIN
HHHHHCCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GLGIATGLLPAYGFALLLKMMINKNNVTFFILGFALAVYANIPVTGVAIFGACLALVLTG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
YSSYKDKFSTKTTQVAADGGSLPDGTGNNGGINYEDEEF
CHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQYVTAILLALIAMLGNGEYFLGSSMLSRPLVMCTLAGLITGNIHEGIIMGATLELAFV
CCHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEE
GSFSIGASIPPEIISGSVLGTAFAIAAGKSTAVALTLGIPIASLVLVIKNLCFIFILPYF
ECCCCCCCCCHHHHCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VHKADAYAAEGDGRGLSRMNVLGGFFSVNLPIGLVVGISYLLGSPVIKSFLAIIPKFIIN
HHHHHCCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GLGIATGLLPAYGFALLLKMMINKNNVTFFILGFALAVYANIPVTGVAIFGACLALVLTG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
YSSYKDKFSTKTTQVAADGGSLPDGTGNNGGINYEDEEF
CHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]