| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491910
Identifier: 116491910
GI number: 116491910
Start: 101661
End: 102524
Strand: Direct
Name: 116491910
Synonym: PEPE_0092
Alternate gene names: NA
Gene position: 101661-102524 (Clockwise)
Preceding gene: 116491909
Following gene: 116491913
Centisome position: 5.55
GC content: 35.19
Gene sequence:
>864_bases ATGCCACGGAACGTTAAAAAATGGAGTATTATATTTTTAATTGCGAGTTTGGTAGGAATTGGAATATTGGCTTGGCCATC AATTCAGTGGATGCATAAAAATGTGACCGCCATTTCTAAACGACATGACTCAAATATGTCACCGGTTATTTTCATTCCGG GGAGTAGTGCTACGCAAAATCGATTTGATGGGTTGATTGATAAGTTAAACGATAGACGTGGGAAACGCCATAGTCTGTTA AAAGTAACGGTCCATACTAATGATCGGATTAGTTACTCGGGATCGATTCGTCCACGTGATAATGAGCCGTTTATTGTTGT TGGTTTTGAGAACAACAAAGATGGTTATAGCAATATTAAAAAACAAGCTAAATGGTTTTCTATTGCATTTAATGCGTTAG CTAAAAAATATCAGTTTAATAATTTTAAGGCCATTGGTCATTCGAATGGTGGTTTGGTATATACAATGTATCTCGAAAAT TATTTCAATCGTGACGATATTTCAATCAAGAAGTTAATGACCATTGGATCACCTTATAATTTCTCAGAAACGTCACTTTC GCATAAAACTCAGATGCTGTCAGACTTTATTAAACAACGTAAAAAAATTCCTAAAACGTTGTCAGTCTATTCGATTATTG GTACTCAGAATTTTGATAATGATGGGATTGTACCAGCACGGAGCGCAGAAGCGGGTAAATATATTTATCAGGGCCAAGCC CAACATTATACTGAAATTACAGTTACAGGAAATGATGCTCAACATTCTGACTTACCACAAAATCAACAAATCATTAATTT AATCGAGCAATATATTTTGGCAAAAAATAAGCCACGTGATGATCAAAATCAGGACACACATTAG
Upstream 100 bases:
>100_bases ACCTTATTGGTTATGGCACTTAACGTAGGAATCGGCGTTTGGCTGTATCGACCATTTGTGAAATTATCCAACCGACTTAA TATTCAGGGAGATGGTCTAG
Downstream 100 bases:
>100_bases TAGTCTGAAGAATAGCAAAACATAGAACAACTTGTTTCAGTAAGAATATAATAAAAAAGTCTAACTTAGTGGGATGATTC CATAAGTCAGACTTTTTTAT
Product: alpha/beta hydrolase superfamily protein
Products: NA
Alternate protein names: Cell Surface Hydrolase; Lipoprotein; Cell Surface Hydrolase Membrane-Bound; Hydrolase; Extracellular Lipase/Esterase; Lipase/Esterase; Alpha/Beta Hydrolase; Acyltransferase; Secreted Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPRNVKKWSIIFLIASLVGIGILAWPSIQWMHKNVTAISKRHDSNMSPVIFIPGSSATQNRFDGLIDKLNDRRGKRHSLL KVTVHTNDRISYSGSIRPRDNEPFIVVGFENNKDGYSNIKKQAKWFSIAFNALAKKYQFNNFKAIGHSNGGLVYTMYLEN YFNRDDISIKKLMTIGSPYNFSETSLSHKTQMLSDFIKQRKKIPKTLSVYSIIGTQNFDNDGIVPARSAEAGKYIYQGQA QHYTEITVTGNDAQHSDLPQNQQIINLIEQYILAKNKPRDDQNQDTH
Sequences:
>Translated_287_residues MPRNVKKWSIIFLIASLVGIGILAWPSIQWMHKNVTAISKRHDSNMSPVIFIPGSSATQNRFDGLIDKLNDRRGKRHSLL KVTVHTNDRISYSGSIRPRDNEPFIVVGFENNKDGYSNIKKQAKWFSIAFNALAKKYQFNNFKAIGHSNGGLVYTMYLEN YFNRDDISIKKLMTIGSPYNFSETSLSHKTQMLSDFIKQRKKIPKTLSVYSIIGTQNFDNDGIVPARSAEAGKYIYQGQA QHYTEITVTGNDAQHSDLPQNQQIINLIEQYILAKNKPRDDQNQDTH >Mature_286_residues PRNVKKWSIIFLIASLVGIGILAWPSIQWMHKNVTAISKRHDSNMSPVIFIPGSSATQNRFDGLIDKLNDRRGKRHSLLK VTVHTNDRISYSGSIRPRDNEPFIVVGFENNKDGYSNIKKQAKWFSIAFNALAKKYQFNNFKAIGHSNGGLVYTMYLENY FNRDDISIKKLMTIGSPYNFSETSLSHKTQMLSDFIKQRKKIPKTLSVYSIIGTQNFDNDGIVPARSAEAGKYIYQGQAQ HYTEITVTGNDAQHSDLPQNQQIINLIEQYILAKNKPRDDQNQDTH
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32745; Mature: 32613
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNVKKWSIIFLIASLVGIGILAWPSIQWMHKNVTAISKRHDSNMSPVIFIPGSSATQN CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHH RFDGLIDKLNDRRGKRHSLLKVTVHTNDRISYSGSIRPRDNEPFIVVGFENNKDGYSNIK HHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCHHHHHH KQAKWFSIAFNALAKKYQFNNFKAIGHSNGGLVYTMYLENYFNRDDISIKKLMTIGSPYN HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHCCCCCCCHHHHHCCCCCCC FSETSLSHKTQMLSDFIKQRKKIPKTLSVYSIIGTQNFDNDGIVPARSAEAGKYIYQGQA CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCC QHYTEITVTGNDAQHSDLPQNQQIINLIEQYILAKNKPRDDQNQDTH CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PRNVKKWSIIFLIASLVGIGILAWPSIQWMHKNVTAISKRHDSNMSPVIFIPGSSATQN CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHH RFDGLIDKLNDRRGKRHSLLKVTVHTNDRISYSGSIRPRDNEPFIVVGFENNKDGYSNIK HHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCHHHHHH KQAKWFSIAFNALAKKYQFNNFKAIGHSNGGLVYTMYLENYFNRDDISIKKLMTIGSPYN HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHCCCCCCCHHHHHCCCCCCC FSETSLSHKTQMLSDFIKQRKKIPKTLSVYSIIGTQNFDNDGIVPARSAEAGKYIYQGQA CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCC QHYTEITVTGNDAQHSDLPQNQQIINLIEQYILAKNKPRDDQNQDTH CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA