| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is chbC [H]
Identifier: 116491909
GI number: 116491909
Start: 100382
End: 101677
Strand: Direct
Name: chbC [H]
Synonym: PEPE_0091
Alternate gene names: 116491909
Gene position: 100382-101677 (Clockwise)
Preceding gene: 116491908
Following gene: 116491910
Centisome position: 5.48
GC content: 37.96
Gene sequence:
>1296_bases ATGTGGGTAAGAAGAGAACAAATTATTCGAAAAATAATACGGCTTCAACAAAATGAGTTATACCAATTAGTGCAAAAAAG TTTAAATTTATTATTCCCATTTGTTCTTATCGGTAGTATCAGCCAACTAATTCAAATCACTATGTTAAATCGAAATAGTT TATTGCCAACAATTTTTGGGTTTTCGTCGTGGCTAAGTCGGTATCGATTCATAGAAATTATTTTTGATCATTTAACGAGT TTAACATTAGGAATAGTAGCTGCTTTAGCTGCATTTAGTATGGCACATTATACAGCCAAACGGTATCAGCGTGATGAAAA ATTAGCGAGTATAACGGGATTAATTGCTTATTTAATCCTTACGGTTCGTTATACAAATAATGGTGAGTTAGCTTTTGGCC AAGATATGCTTGGGATGGGAGGTTTGTTTTTAGGTTTTTTGGTAGGCTATCTGGTTGGACTAAGTTTTAAGCATTTGGCA AATAGCCAGCAGCAGGATAAATCTTCTTCAGGAGTAACATGGAATCGTGCGTTAGATTCATTACGAGCAATTATAATTGT GCTGGTTGTGGCGATTTGCTTTAGTATTTTATTAAATTGGTTGGCGATTTCGGTTTTACCAGATCAAGTTATTCTAAGAT TACAATCACTAAAGGCTAACCAAACTTCGTTGCTATTTTCTGTAGCAATCGTACTATTGGCTGGCATAATGACTTTTTTC GGGTTGACCAGTATGCCAATACTGGCACATTTTGGACGTAATGGCGTCGCAATGACTGCGAATTTAAACTATGCCCTTAT ACATCACACGATTTGGGGAGTACCGTATCCTTTTTCATTAGGGACGTTATATGAATCTTTTGGCGCGATTGGGGGAACGG GAAGTACGCTCTCATTAGTGATTGCAATTTTCTTGTTCAGTAATCAACGTGATCAACAGCTGATTGGCCGATGGTCGTTG CTGCCAGTATTATTTAACTTTAATAGTGCGATATTAGTGGGTGTTCCAGTTTTAGGAAATGGTCTATATATTATTCCATT TCTATTAGTTCCACTAGTTAACGTAGGAATCGCTGCAAGCGCCATTGCTTTACATTTAATGCCTGCTGTAGTTTATCAAG TGCCGTTGGGAACTCCCAGTCTTTTGCAGGCCCTTATTGGAACCAATGGGAATTGGGTAACCTTATTGGTTATGGCACTT AACGTAGGAATCGGCGTTTGGCTGTATCGACCATTTGTGAAATTATCCAACCGACTTAATATTCAGGGAGATGGTCTAGA TGCCACGGAACGTTAA
Upstream 100 bases:
>100_bases GGTTAGATATAAATAATAGCAACGCGGTGTGCAATTCGATAATGATTCAACTAGAATAAAGATAATAGTAGGAGAGATTA GTTTAAAGAAGGAAAATCTA
Downstream 100 bases:
>100_bases AAAATGGAGTATTATATTTTTAATTGCGAGTTTGGTAGGAATTGGAATATTGGCTTGGCCATCAATTCAGTGGATGCATA AAAATGTGACCGCCATTTCT
Product: cellobiose-specific PTS system IIC component
Products: protein histidine; sugar phosphate
Alternate protein names: EIIC-Chb; PTS system N,N'-diacetylchitobiose-specific EIIC component [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MWVRREQIIRKIIRLQQNELYQLVQKSLNLLFPFVLIGSISQLIQITMLNRNSLLPTIFGFSSWLSRYRFIEIIFDHLTS LTLGIVAALAAFSMAHYTAKRYQRDEKLASITGLIAYLILTVRYTNNGELAFGQDMLGMGGLFLGFLVGYLVGLSFKHLA NSQQQDKSSSGVTWNRALDSLRAIIIVLVVAICFSILLNWLAISVLPDQVILRLQSLKANQTSLLFSVAIVLLAGIMTFF GLTSMPILAHFGRNGVAMTANLNYALIHHTIWGVPYPFSLGTLYESFGAIGGTGSTLSLVIAIFLFSNQRDQQLIGRWSL LPVLFNFNSAILVGVPVLGNGLYIIPFLLVPLVNVGIAASAIALHLMPAVVYQVPLGTPSLLQALIGTNGNWVTLLVMAL NVGIGVWLYRPFVKLSNRLNIQGDGLDATER
Sequences:
>Translated_431_residues MWVRREQIIRKIIRLQQNELYQLVQKSLNLLFPFVLIGSISQLIQITMLNRNSLLPTIFGFSSWLSRYRFIEIIFDHLTS LTLGIVAALAAFSMAHYTAKRYQRDEKLASITGLIAYLILTVRYTNNGELAFGQDMLGMGGLFLGFLVGYLVGLSFKHLA NSQQQDKSSSGVTWNRALDSLRAIIIVLVVAICFSILLNWLAISVLPDQVILRLQSLKANQTSLLFSVAIVLLAGIMTFF GLTSMPILAHFGRNGVAMTANLNYALIHHTIWGVPYPFSLGTLYESFGAIGGTGSTLSLVIAIFLFSNQRDQQLIGRWSL LPVLFNFNSAILVGVPVLGNGLYIIPFLLVPLVNVGIAASAIALHLMPAVVYQVPLGTPSLLQALIGTNGNWVTLLVMAL NVGIGVWLYRPFVKLSNRLNIQGDGLDATER >Mature_431_residues MWVRREQIIRKIIRLQQNELYQLVQKSLNLLFPFVLIGSISQLIQITMLNRNSLLPTIFGFSSWLSRYRFIEIIFDHLTS LTLGIVAALAAFSMAHYTAKRYQRDEKLASITGLIAYLILTVRYTNNGELAFGQDMLGMGGLFLGFLVGYLVGLSFKHLA NSQQQDKSSSGVTWNRALDSLRAIIIVLVVAICFSILLNWLAISVLPDQVILRLQSLKANQTSLLFSVAIVLLAGIMTFF GLTSMPILAHFGRNGVAMTANLNYALIHHTIWGVPYPFSLGTLYESFGAIGGTGSTLSLVIAIFLFSNQRDQQLIGRWSL LPVLFNFNSAILVGVPVLGNGLYIIPFLLVPLVNVGIAASAIALHLMPAVVYQVPLGTPSLLQALIGTNGNWVTLLVMAL NVGIGVWLYRPFVKLSNRLNIQGDGLDATER
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788032, Length=368, Percent_Identity=26.6304347826087, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003352 - InterPro: IPR004796 - InterPro: IPR004501 [H]
Pfam domain/function: PF02378 PTS_EIIC [H]
EC number: 2.7.1.69
Molecular weight: Translated: 47497; Mature: 47497
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS51105 PTS_EIIC_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVRREQIIRKIIRLQQNELYQLVQKSLNLLFPFVLIGSISQLIQITMLNRNSLLPTIFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FSSWLSRYRFIEIIFDHLTSLTLGIVAALAAFSMAHYTAKRYQRDEKLASITGLIAYLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVRYTNNGELAFGQDMLGMGGLFLGFLVGYLVGLSFKHLANSQQQDKSSSGVTWNRALDS HEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCHHHHHHH LRAIIIVLVVAICFSILLNWLAISVLPDQVILRLQSLKANQTSLLFSVAIVLLAGIMTFF HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GLTSMPILAHFGRNGVAMTANLNYALIHHTIWGVPYPFSLGTLYESFGAIGGTGSTLSLV HHHCCHHHHHCCCCCEEEEECCCCEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH IAIFLFSNQRDQQLIGRWSLLPVLFNFNSAILVGVPVLGNGLYIIPFLLVPLVNVGIAAS HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHH AIALHLMPAVVYQVPLGTPSLLQALIGTNGNWVTLLVMALNVGIGVWLYRPFVKLSNRLN HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IQGDGLDATER CCCCCCCCCCC >Mature Secondary Structure MWVRREQIIRKIIRLQQNELYQLVQKSLNLLFPFVLIGSISQLIQITMLNRNSLLPTIFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FSSWLSRYRFIEIIFDHLTSLTLGIVAALAAFSMAHYTAKRYQRDEKLASITGLIAYLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVRYTNNGELAFGQDMLGMGGLFLGFLVGYLVGLSFKHLANSQQQDKSSSGVTWNRALDS HEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCHHHHHHH LRAIIIVLVVAICFSILLNWLAISVLPDQVILRLQSLKANQTSLLFSVAIVLLAGIMTFF HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GLTSMPILAHFGRNGVAMTANLNYALIHHTIWGVPYPFSLGTLYESFGAIGGTGSTLSLV HHHCCHHHHHCCCCCEEEEECCCCEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH IAIFLFSNQRDQQLIGRWSLLPVLFNFNSAILVGVPVLGNGLYIIPFLLVPLVNVGIAAS HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHH AIALHLMPAVVYQVPLGTPSLLQALIGTNGNWVTLLVMALNVGIGVWLYRPFVKLSNRLN HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IQGDGLDATER CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2179047; 9097039; 9278503; 2092358; 9405618; 10913117 [H]